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Topologically faithful image segmentation via induced matching of persistence barcodes


Nov 28, 2022
Nico Stucki, Johannes C. Paetzold, Suprosanna Shit, Bjoern Menze, Ulrich Bauer

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Automated analysis of diabetic retinopathy using vessel segmentation maps as inductive bias


Oct 28, 2022
Linus Kreitner, Ivan Ezhov, Daniel Rueckert, Johannes C. Paetzold, Martin J. Menten

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* Submission for MICCAI 2022 Diabetic Retinopathy Analysis Challenge (DRAC) Proceedings, DOI: 10.5281/zenodo.6362349 

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Physiology-based simulation of the retinal vasculature enables annotation-free segmentation of OCT angiographs


Jul 22, 2022
Martin J. Menten, Johannes C. Paetzold, Alina Dima, Bjoern H. Menze, Benjamin Knier, Daniel Rueckert

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* Accepted at MICCAI 2022 

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SoK: Differential Privacy on Graph-Structured Data


Mar 17, 2022
Tamara T. Mueller, Dmitrii Usynin, Johannes C. Paetzold, Daniel Rueckert, Georgios Kaissis

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Differentially Private Graph Classification with GNNs


Feb 08, 2022
Tamara T. Mueller, Johannes C. Paetzold, Chinmay Prabhakar, Dmitrii Usynin, Daniel Rueckert, Georgios Kaissis

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Generalized Wasserstein Dice Loss, Test-time Augmentation, and Transformers for the BraTS 2021 challenge


Dec 24, 2021
Lucas Fidon, Suprosanna Shit, Ivan Ezhov, Johannes C. Paetzold, S├ębastien Ourselin, Tom Vercauteren

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* BraTS 2021 challenge 

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FedCostWAvg: A new averaging for better Federated Learning


Nov 16, 2021
Leon M├Ąchler, Ivan Ezhov, Florian Kofler, Suprosanna Shit, Johannes C. Paetzold, Timo Loehr, Benedikt Wiestler, Bjoern Menze

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Semi-Implicit Neural Solver for Time-dependent Partial Differential Equations


Sep 03, 2021
Suprosanna Shit, Ivan Ezhov, Leon M├Ąchler, Abinav R., Jana Lipkova, Johannes C. Paetzold, Florian Kofler, Marie Piraud, Bjoern H. Menze

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Whole Brain Vessel Graphs: A Dataset and Benchmark for Graph Learning and Neuroscience (VesselGraph)


Aug 30, 2021
Johannes C. Paetzold, Julian McGinnis, Suprosanna Shit, Ivan Ezhov, Paul B├╝schl, Chinmay Prabhakar, Mihail I. Todorov, Anjany Sekuboyina, Georgios Kaissis, Ali Ert├╝rk, Stephan G├╝nnemann, Bjoern H. Menze

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METGAN: Generative Tumour Inpainting and Modality Synthesis in Light Sheet Microscopy


Apr 23, 2021
Izabela Horvath, Johannes C. Paetzold, Oliver Schoppe, Rami Al-Maskari, Ivan Ezhov, Suprosanna Shit, Hongwei Li, Ali Ertuerk, Bjoern H. Menze

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