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Disentangling Representations of Text by Masking Transformers


Apr 14, 2021
Xiongyi Zhang, Jan-Willem van de Meent, Byron C. Wallace

* 11 pages, 6 figures 

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On the Impact of Random Seeds on the Fairness of Clinical Classifiers


Apr 13, 2021
Silvio Amir, Jan-Willem van de Meent, Byron C. Wallace

* Accepted for publication at NAACL 2021 

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Paragraph-level Simplification of Medical Texts


Apr 12, 2021
Ashwin Devaraj, Iain J. Marshall, Byron C. Wallace, Junyi Jessy Li

* NAACL 2021 

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An Empirical Comparison of Instance Attribution Methods for NLP


Apr 09, 2021
Pouya Pezeshkpour, Sarthak Jain, Byron C. Wallace, Sameer Singh

* NAACL 2021 

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Unsupervised Data Augmentation with Naive Augmentation and without Unlabeled Data


Oct 22, 2020
David Lowell, Brian E. Howard, Zachary C. Lipton, Byron C. Wallace


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Understanding Clinical Trial Reports: Extracting Medical Entities and Their Relations


Oct 08, 2020
Benjamin E. Nye, Jay DeYoung, Eric Lehman, Ani Nenkova, Iain J. Marshall, Byron C. Wallace


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Generating (Factual?) Narrative Summaries of RCTs: Experiments with Neural Multi-Document Summarization


Aug 25, 2020
Byron C. Wallace, Sayantan Saha, Frank Soboczenski, Iain J. Marshall

* 11 pages, 2 figures 

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Semi-Automating Knowledge Base Construction for Cancer Genetics


May 26, 2020
Somin Wadhwa, Kanhua Yin, Kevin S. Hughes, Byron C. Wallace

* In proceedings of the Conference on Automated Knowledge Base Construction (AKBC), 2020 

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Trialstreamer: Mapping and Browsing Medical Evidence in Real-Time


May 21, 2020
Benjamin E. Nye, Ani Nenkova, Iain J. Marshall, Byron C. Wallace

* 6 pages, 4 figures 

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Evidence Inference 2.0: More Data, Better Models


May 14, 2020
Jay DeYoung, Eric Lehman, Ben Nye, Iain J. Marshall, Byron C. Wallace

* Accepted as workshop paper into BioNLP Updated results from SciBERT to Biomed RoBERTa 

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Explaining Black Box Predictions and Unveiling Data Artifacts through Influence Functions


May 14, 2020
Xiaochuang Han, Byron C. Wallace, Yulia Tsvetkov

* ACL 2020 

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Learning to Faithfully Rationalize by Construction


Apr 30, 2020
Sarthak Jain, Sarah Wiegreffe, Yuval Pinter, Byron C. Wallace

* ACL2020 Camera Ready Submission 

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Query-Focused EHR Summarization to Aid Imaging Diagnosis


Apr 26, 2020
Denis Jered McInerney, Borna Dabiri, Anne-Sophie Touret, Geoffrey Young, Jan-Willem van de Meent, Byron C. Wallace


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Interpretability Analysis for Named Entity Recognition to Understand System Predictions and How They Can Improve


Apr 09, 2020
Oshin Agarwal, Yinfei Yang, Byron C. Wallace, Ani Nenkova


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Entity-Switched Datasets: An Approach to Auditing the In-Domain Robustness of Named Entity Recognition Models


Apr 08, 2020
Oshin Agarwal, Yinfei Yang, Byron C. Wallace, Ani Nenkova


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ERASER: A Benchmark to Evaluate Rationalized NLP Models


Nov 08, 2019
Jay DeYoung, Sarthak Jain, Nazneen Fatema Rajani, Eric Lehman, Caiming Xiong, Richard Socher, Byron C. Wallace

* https://github.com/jayded/eraserbenchmark http://www.eraserbenchmark.com/ 

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Learning to Identify Patients at Risk of Uncontrolled Hypertension Using Electronic Health Records Data


Jun 28, 2019
Ramin Mohammadi, Sarthak Jain, Stephen Agboola, Ramya Palacholla, Sagar Kamarthi, Byron C. Wallace

* Accepted at The AMIA informatics summit 2019 

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Predicting Annotation Difficulty to Improve Task Routing and Model Performance for Biomedical Information Extraction


May 19, 2019
Yinfei Yang, Oshin Agarwal, Chris Tar, Byron C. Wallace, Ani Nenkova

* NAACL2019 

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An Analysis of Attention over Clinical Notes for Predictive Tasks


Apr 05, 2019
Sarthak Jain, Ramin Mohammadi, Byron C. Wallace

* Accepted at The 2nd Clinical Natural Language Processing Workshop (At NAACL 2019) 

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Inferring Which Medical Treatments Work from Reports of Clinical Trials


Apr 04, 2019
Eric Lehman, Jay DeYoung, Regina Barzilay, Byron C. Wallace

* Accepted to NAACL 2019 

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Attention is not Explanation


Apr 04, 2019
Sarthak Jain, Byron C. Wallace

* Accepted as NAACL 2019 Long Paper. Draft Version 

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Structured Neural Topic Models for Reviews


Jan 02, 2019
Babak Esmaeili, Hongyi Huang, Byron C. Wallace, Jan-Willem van de Meent


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Structured Representations for Reviews:Aspect-Based Variational Hidden Factor Models


Dec 12, 2018
Babak Esmaeili, Hongyi Huang, Byron C. Wallace, Jan-Willem van de Meent


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Structured Multi-Label Biomedical Text Tagging via Attentive Neural Tree Decoding


Oct 02, 2018
Gaurav Singh, James Thomas, Iain J. Marshall, John Shawe-Taylor, Byron C. Wallace

* Accepted for Publication in EMNLP 2018 

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Learning Disentangled Representations of Texts with Application to Biomedical Abstracts


Sep 03, 2018
Sarthak Jain, Edward Banner, Jan-Willem van de Meent, Iain J. Marshall, Byron C. Wallace

* Accepted to EMNLP 2018 

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How transferable are the datasets collected by active learners?


Jul 12, 2018
David Lowell, Zachary C. Lipton, Byron C. Wallace


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A Corpus with Multi-Level Annotations of Patients, Interventions and Outcomes to Support Language Processing for Medical Literature


Jun 11, 2018
Benjamin Nye, Junyi Jessy Li, Roma Patel, Yinfei Yang, Iain J. Marshall, Ani Nenkova, Byron C. Wallace

* ACL 2018 

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