Selective Fine-Tuning of GPT Architectures for Parameter-Efficient Clinical Text Classification

The rapid expansion of electronic health record (EHR) systems has generated large volumes of unstructured clinical narratives that contain valuable information for disease identification, patient cohort discovery, and clinical decision support. Extracting structured knowledge from these free-text documents remains challenging because clinical language is highly specialized, labeled datasets are limited, and full fine-tuning of large pretrained language models can require substantial computational resources. Efficient adaptation strategies are therefore essential for practical clinical natural language processing applications. This study proposes a parameter-efficient selective fine-tuning framework for adapting GPT-2 to clinical text classification tasks. Instead of updating the entire pretrained model, the majority of network parameters are frozen, and only the final Transformer block, the final layer normalization module, and a lightweight classification head are updated during training. This design substantially reduces the number of trainable parameters while preserving the contextual representation capabilities learned during pretraining. The proposed approach is evaluated using radiology reports from the MIMIC-IV-Note dataset with automatically derived CheXpert-style labels. Experiments on 50,000 radiology reports demonstrate that selective fine-tuning achieves approximately 91% classification accuracy while updating fewer than 6% of the model parameters. Comparative experiments with head-only training and full-model fine-tuning show that the proposed method provides a favorable balance between predictive performance and computational efficiency. These results indicate that selective fine-tuning offers an efficient and scalable framework for clinical text classification.

How do LLMs Compute Verbal Confidence

Verbal confidence -- prompting LLMs to state their confidence as a number or category -- is widely used to extract uncertainty estimates from black-box models. However, how LLMs internally generate such scores remains unknown. We address two questions: first, when confidence is computed - just-in-time when requested, or automatically during answer generation and cached for later retrieval; and second, what verbal confidence represents - token log-probabilities, or a richer evaluation of answer quality? Focusing on Gemma 3 27B and Qwen 2.5 7B, we provide convergent evidence for cached retrieval. Activation steering, patching, noising, and swap experiments reveal that confidence representations emerge at answer-adjacent positions before appearing at the verbalization site. Attention blocking pinpoints the information flow: confidence is gathered from answer tokens, cached at the first post-answer position, then retrieved for output. Critically, linear probing and variance partitioning reveal that these cached representations explain substantial variance in verbal confidence beyond token log-probabilities, suggesting a richer answer-quality evaluation rather than a simple fluency readout. These findings demonstrate that verbal confidence reflects automatic, sophisticated self-evaluation -- not post-hoc reconstruction -- with implications for understanding metacognition in LLMs and improving calibration.

WebPII: Benchmarking Visual PII Detection for Computer-Use Agents

Computer use agents create new privacy risks: training data collected from real websites inevitably contains sensitive information, and cloud-hosted inference exposes user screenshots. Detecting personally identifiable information in web screenshots is critical for privacy-preserving deployment, but no public benchmark exists for this task. We introduce WebPII, a fine-grained synthetic benchmark of 44,865 annotated e-commerce UI images designed with three key properties: extended PII taxonomy including transaction-level identifiers that enable reidentification, anticipatory detection for partially-filled forms where users are actively entering data, and scalable generation through VLM-based UI reproduction. Experiments validate that these design choices improve layout-invariant detection across diverse interfaces and generalization to held-out page types. We train WebRedact to demonstrate practical utility, more than doubling text-extraction baseline accuracy (0.753 vs 0.357 mAP@50) at real-time CPU latency (20ms). We release the dataset and model to support privacy-preserving computer use research.

InViC: Intent-aware Visual Cues for Medical Visual Question Answering

Medical visual question answering (Med-VQA) aims to answer clinically relevant questions grounded in medical images. However, existing multimodal large language models (MLLMs) often exhibit shortcut answering, producing plausible responses by exploiting language priors or dataset biases while insufficiently attending to visual evidence. This behavior undermines clinical reliability, especially when subtle imaging findings are decisive. We propose a lightweight plug-in framework, termed Intent-aware Visual Cues (InViC), to explicitly enhance image-based answer generation in medical VQA. InViC introduces a Cue Tokens Extraction (CTE) module that distills dense visual tokens into a compact set of K question-conditioned cue tokens, which serve as structured visual intermediaries injected into the LLM decoder to promote intent-aligned visual evidence. To discourage bypassing of visual information, we further design a two-stage fine-tuning strategy with a cue-bottleneck attention mask. In Stage I, we employ an attention mask to block the LLM's direct view of raw visual features, thereby funneling all visual evidence through the cue pathway. In Stage II, standard causal attention is restored to train the LLM to jointly exploit the visual and cue tokens. We evaluate InViC on three public Med-VQA benchmarks (VQA-RAD, SLAKE, and ImageCLEF VQA-Med 2019) across multiple representative MLLMs. InViC consistently improves over zero-shot inference and standard LoRA fine-tuning, demonstrating that intent-aware visual cues with bottlenecked training is a practical and effective strategy for improving trustworthy Med-VQA.

LLM-MINE: Large Language Model based Alzheimer's Disease and Related Dementias Phenotypes Mining from Clinical Notes

Accurate extraction of Alzheimer's Disease and Related Dementias (ADRD) phenotypes from electronic health records (EHR) is critical for early-stage detection and disease staging. However, this information is usually embedded in unstructured textual data rather than tabular data, making it difficult to be extracted accurately. We therefore propose LLM-MINE, a Large Language Model-based phenotype mining framework for automatic extraction of ADRD phenotypes from clinical notes. Using two expert-defined phenotype lists, we evaluate the extracted phenotypes by examining their statistical significance across cohorts and their utility for unsupervised disease staging. Chi-square analyses confirm statistically significant phenotype differences across cohorts, with memory impairment being the strongest discriminator. Few-shot prompting with the combined phenotype lists achieves the best clustering performance (ARI=0.290, NMI=0.232), substantially outperforming biomedical NER and dictionary-based baselines. Our results demonstrate that LLM-based phenotype extraction is a promising tool for discovering clinically meaningful ADRD signals from unstructured notes.

Benchmarking Machine Learning Approaches for Polarization Mapping in Ferroelectrics Using 4D-STEM

Four-dimensional scanning transmission electron microscopy (4D-STEM) provides rich, atomic-scale insights into materials structures. However, extracting specific physical properties - such as polarization directions essential for understanding functional properties of ferroelectrics - remains a significant challenge. In this study, we systematically benchmark multiple machine learning models, namely ResNet, VGG, a custom convolutional neural network, and PCA-informed k-Nearest Neighbors, to automate the detection of polarization directions from 4D-STEM diffraction patterns in ferroelectric potassium sodium niobate. While models trained on synthetic data achieve high accuracy on idealized synthetic diffraction patterns of equivalent thickness, the domain gap between simulation and experiment remains a critical barrier to real-world deployment. In this context, a custom made prototype representation training regime and PCA-based methods, combined with data augmentation and filtering, can better bridge this gap. Error analysis reveals periodic missclassification patterns, indicating that not all diffraction patterns carry enough information for a successful classification. Additionally, our qualitative analysis demonstrates that irregularities in the model's prediction patterns correlate with defects in the crystal structure, suggesting that supervised models could be used for detecting structural defects. These findings guide the development of robust, transferable machine learning tools for electron microscopy analysis.

Membership Inference for Contrastive Pre-training Models with Text-only PII Queries

Contrastive pretraining models such as CLIP and CLAP underpin many vision-language and audio-language systems, yet their reliance on web-scale data raises growing concerns about memorizing Personally Identifiable Information (PII). Auditing such models via membership inference is challenging in practice: shadow-model MIAs are computationally prohibitive for large multimodal backbones, and existing multimodal attacks typically require querying the target with paired biometric inputs, thereby directly exposing sensitive biometric information to the target model. We propose Unimodal Membership Inference Detector (UMID), a text-only auditing framework that performs text-guided cross-modal latent inversion and extracts two complementary signals, similarity (alignment to the queried text) and variability (consistency across randomized inversions). UMID compares these statistics to a lightweight non-member reference constructed from synthetic gibberish and makes decisions via an ensemble of unsupervised anomaly detectors. Comprehensive experiments across diverse CLIP and CLAP architectures demonstrate that UMID significantly improves the effectiveness and efficiency over prior MIAs, delivering strong detection performance with sub-second auditing cost while complying with realistic privacy constraints.

Multi-Grained Vision-Language Alignment for Domain Generalized Person Re-Identification

Domain Generalized person Re-identification (DG Re-ID) is a challenging task, where models are trained on source domains but tested on unseen target domains. Although previous pure vision-based models have achieved significant progress, the performance remains further improved. Recently, Vision-Language Models (VLMs) present outstanding generalization capabilities in various visual applications. However, directly adapting a VLM to Re-ID shows limited generalization improvement. This is because the VLM only produces with global features that are insensitive to ID nuances. To tacle this problem, we propose a CLIP-based multi-grained vision-language alignment framework in this work. Specifically, several multi-grained prompts are introduced in language modality to describe different body parts and align with their counterparts in vision modality. To obtain fine-grained visual information, an adaptively masked multi-head self-attention module is employed to precisely extract specific part features. To train the proposed module, an MLLM-based visual grounding expert is employed to automatically generate pseudo labels of body parts for supervision. Extensive experiments conducted on both single- and multi-source generalization protocols demonstrate the superior performance of our approach. The implementation code will be released at https://github.com/RikoLi/MUVA.

Automatic Inter-document Multi-hop Scientific QA Generation

Existing automatic scientific question generation studies mainly focus on single-document factoid QA, overlooking the inter-document reasoning crucial for scientific understanding. We present AIM-SciQA, an automated framework for generating multi-document, multi-hop scientific QA datasets. AIM-SciQA extracts single-hop QAs using large language models (LLMs) with machine reading comprehension and constructs cross-document relations based on embedding-based semantic alignment while selectively leveraging citation information. Applied to 8,211 PubMed Central papers, it produced 411,409 single-hop and 13,672 multi-hop QAs, forming the IM-SciQA dataset. Human and automatic validation confirmed high factual consistency, and experimental results demonstrate that IM-SciQA effectively differentiates reasoning capabilities across retrieval and QA stages, providing a realistic and interpretable benchmark for retrieval-augmented scientific reasoning. We further extend this framework to construct CIM-SciQA, a citation-guided variant achieving comparable performance to the Oracle setting, reinforcing the dataset's validity and generality.

ModTrack: Sensor-Agnostic Multi-View Tracking via Identity-Informed PHD Filtering with Covariance Propagation

Multi-View Multi-Object Tracking (MV-MOT) aims to localize and maintain consistent identities of objects observed by multiple sensors. This task is challenging, as viewpoint changes and occlusion disrupt identity consistency across views and time. Recent end-to-end approaches address this by jointly learning 2D Bird's Eye View (BEV) representations and identity associations, achieving high tracking accuracy. However, these methods offer no principled uncertainty accounting and remain tightly coupled to their training configuration, limiting generalization across sensor layouts, modalities, or datasets without retraining. We propose ModTrack, a modular MV-MOT system that matches end-to-end performance while providing cross-modal, sensor-agnostic generalization and traceable uncertainty. ModTrack confines learning methods to just the \textit{Detection and Feature Extraction} stage of the MV-MOT pipeline, performing all fusion, association, and tracking with closed-form analytical methods. Our design reduces each sensor's output to calibrated position-covariance pairs $(\mathbf{z}, R)$; cross-view clustering and precision-weighted fusion then yield unified estimates $(\hat{\mathbf{z}}, \hat{R})$ for identity assignment and temporal tracking. A feedback-coupled, identity-informed Gaussian Mixture Probability Hypothesis Density (GM-PHD) filter with HMM motion modes uses these fused estimates to maintain identities under missed detections and heavy occlusion. ModTrack achieves 95.5 IDF1 and 91.4 MOTA on \textit{WildTrack}, surpassing all prior modular methods by over 21 points and rivaling the state-of-the-art end-to-end methods while providing deployment flexibility they cannot. Specifically, the same tracker core transfers unchanged to \textit{MultiviewX} and \textit{RadarScenes}, with only perception-module replacement required to extend to new domains and sensor modalities.