A Tutorial on MRI Reconstruction: From Modern Methods to Clinical Implications

MRI is an indispensable clinical tool, offering a rich variety of tissue contrasts to support broad diagnostic and research applications. Clinical exams routinely acquire multiple structural sequences that provide complementary information for differential diagnosis, while research protocols often incorporate advanced functional, diffusion, spectroscopic, and relaxometry sequences to capture multidimensional insights into tissue structure and composition. However, these capabilities come at the cost of prolonged scan times, which reduce patient throughput, increase susceptibility to motion artifacts, and may require trade-offs in image quality or diagnostic scope. Over the last two decades, advances in image reconstruction algorithms--alongside improvements in hardware and pulse sequence design--have made it possible to accelerate acquisitions while preserving diagnostic quality. Central to this progress is the ability to incorporate prior information to regularize the solutions to the reconstruction problem. In this tutorial, we overview the basics of MRI reconstruction and highlight state-of-the-art approaches, beginning with classical methods that rely on explicit hand-crafted priors, and then turning to deep learning methods that leverage a combination of learned and crafted priors to further push the performance envelope. We also explore the translational aspects and eventual clinical implications of these methods. We conclude by discussing future directions to address remaining challenges in MRI reconstruction. The tutorial is accompanied by a Python toolbox (https://github.com/tutorial-MRI-recon/tutorial) to demonstrate select methods discussed in the article.

Doctor Approved: Generating Medically Accurate Skin Disease Images through AI-Expert Feedback

Paucity of medical data severely limits the generalizability of diagnostic ML models, as the full spectrum of disease variability can not be represented by a small clinical dataset. To address this, diffusion models (DMs) have been considered as a promising avenue for synthetic image generation and augmentation. However, they frequently produce medically inaccurate images, deteriorating the model performance. Expert domain knowledge is critical for synthesizing images that correctly encode clinical information, especially when data is scarce and quality outweighs quantity. Existing approaches for incorporating human feedback, such as reinforcement learning (RL) and Direct Preference Optimization (DPO), rely on robust reward functions or demand labor-intensive expert evaluations. Recent progress in Multimodal Large Language Models (MLLMs) reveals their strong visual reasoning capabilities, making them adept candidates as evaluators. In this work, we propose a novel framework, coined MAGIC (Medically Accurate Generation of Images through AI-Expert Collaboration), that synthesizes clinically accurate skin disease images for data augmentation. Our method creatively translates expert-defined criteria into actionable feedback for image synthesis of DMs, significantly improving clinical accuracy while reducing the direct human workload. Experiments demonstrate that our method greatly improves the clinical quality of synthesized skin disease images, with outputs aligning with dermatologist assessments. Additionally, augmenting training data with these synthesized images improves diagnostic accuracy by +9.02% on a challenging 20-condition skin disease classification task, and by +13.89% in the few-shot setting.

GM-LDM: Latent Diffusion Model for Brain Biomarker Identification through Functional Data-Driven Gray Matter Synthesis

Generative models based on deep learning have shown significant potential in medical imaging, particularly for modality transformation and multimodal fusion in MRI-based brain imaging. This study introduces GM-LDM, a novel framework that leverages the latent diffusion model (LDM) to enhance the efficiency and precision of MRI generation tasks. GM-LDM integrates a 3D autoencoder, pre-trained on the large-scale ABCD MRI dataset, achieving statistical consistency through KL divergence loss. We employ a Vision Transformer (ViT)-based encoder-decoder as the denoising network to optimize generation quality. The framework flexibly incorporates conditional data, such as functional network connectivity (FNC) data, enabling personalized brain imaging, biomarker identification, and functional-to-structural information translation for brain diseases like schizophrenia.

SpecCLIP: Aligning and Translating Spectroscopic Measurements for Stars

In recent years, large language models (LLMs) have transformed natural language understanding through vast datasets and large-scale parameterization. Inspired by this success, we present SpecCLIP, a foundation model framework that extends LLM-inspired methodologies to stellar spectral analysis. Stellar spectra, akin to structured language, encode rich physical and chemical information about stars. By training foundation models on large-scale spectral datasets, our goal is to learn robust and informative embeddings that support diverse downstream applications. As a proof of concept, SpecCLIP involves pre-training on two spectral types--LAMOST low-resolution and Gaia XP--followed by contrastive alignment using the CLIP (Contrastive Language-Image Pre-training) framework, adapted to associate spectra from different instruments. This alignment is complemented by auxiliary decoders that preserve spectrum-specific information and enable translation (prediction) between spectral types, with the former achieved by maximizing mutual information between embeddings and input spectra. The result is a cross-spectrum framework enabling intrinsic calibration and flexible applications across instruments. We demonstrate that fine-tuning these models on moderate-sized labeled datasets improves adaptability to tasks such as stellar-parameter estimation and chemical-abundance determination. SpecCLIP also enhances the accuracy and precision of parameter estimates benchmarked against external survey data. Additionally, its similarity search and cross-spectrum prediction capabilities offer potential for anomaly detection. Our results suggest that contrastively trained foundation models enriched with spectrum-aware decoders can advance precision stellar spectroscopy.

Motion-Aware Adaptive Pixel Pruning for Efficient Local Motion Deblurring

Local motion blur in digital images originates from the relative motion between dynamic objects and static imaging systems during exposure. Existing deblurring methods face significant challenges in addressing this problem due to their inefficient allocation of computational resources and inadequate handling of spatially varying blur patterns. To overcome these limitations, we first propose a trainable mask predictor that identifies blurred regions in the image. During training, we employ blur masks to exclude sharp regions. For inference optimization, we implement structural reparameterization by converting $3\times 3$ convolutions to computationally efficient $1\times 1$ convolutions, enabling pixel-level pruning of sharp areas to reduce computation. Second, we develop an intra-frame motion analyzer that translates relative pixel displacements into motion trajectories, establishing adaptive guidance for region-specific blur restoration. Our method is trained end-to-end using a combination of reconstruction loss, reblur loss, and mask loss guided by annotated blur masks. Extensive experiments demonstrate superior performance over state-of-the-art methods on both local and global blur datasets while reducing FLOPs by 49\% compared to SOTA models (e.g., LMD-ViT). The source code is available at https://github.com/shangwei5/M2AENet.

CaMMT: Benchmarking Culturally Aware Multimodal Machine Translation

Cultural content poses challenges for machine translation systems due to the differences in conceptualizations between cultures, where language alone may fail to convey sufficient context to capture region-specific meanings. In this work, we investigate whether images can act as cultural context in multimodal translation. We introduce CaMMT, a human-curated benchmark of over 5,800 triples of images along with parallel captions in English and regional languages. Using this dataset, we evaluate five Vision Language Models (VLMs) in text-only and text+image settings. Through automatic and human evaluations, we find that visual context generally improves translation quality, especially in handling Culturally-Specific Items (CSIs), disambiguation, and correct gender usage. By releasing CaMMT, we aim to support broader efforts in building and evaluating multimodal translation systems that are better aligned with cultural nuance and regional variation.

Insights Informed Generative AI for Design: Incorporating Real-world Data for Text-to-Image Output

Generative AI, specifically text-to-image models, have revolutionized interior architectural design by enabling the rapid translation of conceptual ideas into visual representations from simple text prompts. While generative AI can produce visually appealing images they often lack actionable data for designers In this work, we propose a novel pipeline that integrates DALL-E 3 with a materials dataset to enrich AI-generated designs with sustainability metrics and material usage insights. After the model generates an interior design image, a post-processing module identifies the top ten materials present and pairs them with carbon dioxide equivalent (CO2e) values from a general materials dictionary. This approach allows designers to immediately evaluate environmental impacts and refine prompts accordingly. We evaluate the system through three user tests: (1) no mention of sustainability to the user prior to the prompting process with generative AI, (2) sustainability goals communicated to the user before prompting, and (3) sustainability goals communicated along with quantitative CO2e data included in the generative AI outputs. Our qualitative and quantitative analyses reveal that the introduction of sustainability metrics in the third test leads to more informed design decisions, however, it can also trigger decision fatigue and lower overall satisfaction. Nevertheless, the majority of participants reported incorporating sustainability principles into their workflows in the third test, underscoring the potential of integrated metrics to guide more ecologically responsible practices. Our findings showcase the importance of balancing design freedom with practical constraints, offering a clear path toward holistic, data-driven solutions in AI-assisted architectural design.

Normalized Radon Cumulative Distribution Transforms for Invariance and Robustness in Optimal Transport Based Image Classification

The Radon cumulative distribution transform (R-CDT), is an easy-to-compute feature extractor that facilitates image classification tasks especially in the small data regime. It is closely related to the sliced Wasserstein distance and provably guaranties the linear separability of image classes that emerge from translations or scalings. In many real-world applications, like the recognition of watermarks in filigranology, however, the data is subject to general affine transformations originating from the measurement process. To overcome this issue, we recently introduced the so-called max-normalized R-CDT that only requires elementary operations and guaranties the separability under arbitrary affine transformations. The aim of this paper is to continue our study of the max-normalized R-CDT especially with respect to its robustness against non-affine image deformations. Our sensitivity analysis shows that its separability properties are stable provided the Wasserstein-infinity distance between the samples can be controlled. Since the Wasserstein-infinity distance only allows small local image deformations, we moreover introduce a mean-normalized version of the R-CDT. In this case, robustness relates to the Wasserstein-2 distance and also covers image deformations caused by impulsive noise for instance. Our theoretical results are supported by numerical experiments showing the effectiveness of our novel feature extractors as well as their robustness against local non-affine deformations and impulsive noise.

How Well Does GPT-4o Understand Vision? Evaluating Multimodal Foundation Models on Standard Computer Vision Tasks

Multimodal foundation models, such as GPT-4o, have recently made remarkable progress, but it is not clear where exactly these models stand in terms of understanding vision. In this paper, we benchmark the performance of popular multimodal foundation models (GPT-4o, o4-mini, Gemini 1.5 Pro and Gemini 2.0 Flash, Claude 3.5 Sonnet, Qwen2-VL, Llama 3.2) on standard computer vision tasks (semantic segmentation, object detection, image classification, depth and surface normal prediction) using established datasets (e.g., COCO, ImageNet and its variants, etc). The main challenges to performing this are: 1) most models are trained to output text and cannot natively express versatile domains, such as segments or 3D geometry, and 2) many leading models are proprietary and accessible only at an API level, i.e., there is no weight access to adapt them. We address these challenges by translating standard vision tasks into equivalent text-promptable and API-compatible tasks via prompt chaining to create a standardized benchmarking framework. We observe that 1) the models are not close to the state-of-the-art specialist models at any task. However, 2) they are respectable generalists; this is remarkable as they are presumably trained on primarily image-text-based tasks. 3) They perform semantic tasks notably better than geometric ones. 4) While the prompt-chaining techniques affect performance, better models exhibit less sensitivity to prompt variations. 5) GPT-4o performs the best among non-reasoning models, securing the top position in 4 out of 6 tasks, 6) reasoning models, e.g. o3, show improvements in geometric tasks, and 7) a preliminary analysis of models with native image generation, like the latest GPT-4o, shows they exhibit quirks like hallucinations and spatial misalignments.

PLD: A Choice-Theoretic List-Wise Knowledge Distillation

Knowledge distillation is a model compression technique in which a compact "student" network is trained to replicate the predictive behavior of a larger "teacher" network. In logit-based knowledge distillation it has become the de facto approach to augment cross-entropy with a distillation term. Typically this term is either a KL divergence-matching marginal probabilities or a correlation-based loss capturing intra- and inter-class relationships but in every case it sits as an add-on to cross-entropy with its own weight that must be carefully tuned. In this paper we adopt a choice-theoretic perspective and recast knowledge distillation under the Plackett-Luce model by interpreting teacher logits as "worth" scores. We introduce Plackett-Luce Distillation (PLD), a weighted list-wise ranking loss in which the teacher model transfers knowledge of its full ranking of classes, weighting each ranked choice by its own confidence. PLD directly optimizes a single teacher-optimal ranking of the true label first, followed by the remaining classes in descending teacher confidence, yielding a convex, translation-invariant surrogate that subsumes weighted cross-entropy. Empirically on standard image classification benchmarks, PLD improves Top-1 accuracy by an average of +0.42% over DIST (arXiv:2205.10536) and +1.04% over KD (arXiv:1503.02531) in homogeneous settings and by +0.48% and +1.09% over DIST and KD, respectively, in heterogeneous settings.