Regional Attention-Enhanced Swin Transformer for Clinically Relevant Medical Image Captioning

Automated medical image captioning translates complex radiological images into diagnostic narratives that can support reporting workflows. We present a Swin-BART encoder-decoder system with a lightweight regional attention module that amplifies diagnostically salient regions before cross-attention. Trained and evaluated on ROCO, our model achieves state-of-the-art semantic fidelity while remaining compact and interpretable. We report results as mean$\pm$std over three seeds and include $95\%$ confidence intervals. Compared with baselines, our approach improves ROUGE (proposed 0.603, ResNet-CNN 0.356, BLIP2-OPT 0.255) and BERTScore (proposed 0.807, BLIP2-OPT 0.645, ResNet-CNN 0.623), with competitive BLEU, CIDEr, and METEOR. We further provide ablations (regional attention on/off and token-count sweep), per-modality analysis (CT/MRI/X-ray), paired significance tests, and qualitative heatmaps that visualize the regions driving each description. Decoding uses beam search (beam size $=4$), length penalty $=1.1$, $no\_repeat\_ngram\_size$ $=3$, and max length $=128$. The proposed design yields accurate, clinically phrased captions and transparent regional attributions, supporting safe research use with a human in the loop.

DT-NVS: Diffusion Transformers for Novel View Synthesis

Generating novel views of a natural scene, e.g., every-day scenes both indoors and outdoors, from a single view is an under-explored problem, even though it is an organic extension to the object-centric novel view synthesis. Existing diffusion-based approaches focus rather on small camera movements in real scenes or only consider unnatural object-centric scenes, limiting their potential applications in real-world settings. In this paper we move away from these constrained regimes and propose a 3D diffusion model trained with image-only losses on a large-scale dataset of real-world, multi-category, unaligned, and casually acquired videos of everyday scenes. We propose DT-NVS, a 3D-aware diffusion model for generalized novel view synthesis that exploits a transformer-based architecture backbone. We make significant contributions to transformer and self-attention architectures to translate images to 3d representations, and novel camera conditioning strategies to allow training on real-world unaligned datasets. In addition, we introduce a novel training paradigm swapping the role of reference frame between the conditioning image and the sampled noisy input. We evaluate our approach on the 3D task of generalized novel view synthesis from a single input image and show improvements over state-of-the-art 3D aware diffusion models and deterministic approaches, while generating diverse outputs.

QSMnet-INR: Single-Orientation Quantitative Susceptibility Mapping via Implicit Neural Representation in k-Space

Quantitative Susceptibility Mapping (QSM) quantifies tissue magnetic susceptibility from magnetic-resonance phase data and plays a crucial role in brain microstructure imaging, iron-deposition assessment, and neurological-disease research. However, single-orientation QSM inversion remains highly ill-posed because the dipole kernel exhibits a cone-null region in the Fourier domain, leading to streaking artifacts and structural loss. To overcome this limitation, we propose QSMnet-INR, a deep, physics-informed framework that integrates an Implicit Neural Representation (INR) into the k-space domain. The INR module continuously models multi-directional dipole responses and explicitly completes the cone-null region, while a frequency-domain residual-weighted Dipole Loss enforces physical consistency. The overall network combines a 3D U-Net-based QSMnet backbone with the INR module through alternating optimization for end-to-end joint training. Experiments on the 2016 QSM Reconstruction Challenge, a multi-orientation GRE dataset, and both in-house and public single-orientation clinical data demonstrate that QSMnet-INR consistently outperforms conventional and recent deep-learning approaches across multiple quantitative metrics. The proposed framework shows notable advantages in structural recovery within cone-null regions and in artifact suppression. Ablation studies further confirm the complementary contributions of the INR module and Dipole Loss to detail preservation and physical stability. Overall, QSMnet-INR effectively alleviates the ill-posedness of single-orientation QSM without requiring multi-orientation acquisition, achieving high accuracy, robustness, and strong cross-scenario generalization-highlighting its potential for clinical translation.

CrochetBench: Can Vision-Language Models Move from Describing to Doing in Crochet Domain?

We present CrochetBench, a benchmark for evaluating the ability of multimodal large language models to perform fine-grained, low-level procedural reasoning in the domain of crochet. Unlike prior benchmarks that focus on high-level description or visual question answering, CrochetBench shifts the emphasis from describing to doing: models are required to recognize stitches, select structurally appropriate instructions, and generate compilable crochet procedures. We adopt the CrochetPARADE DSL as our intermediate representation, enabling structural validation and functional evaluation via execution. The benchmark covers tasks including stitch classification, instruction grounding, and both natural language and image-to-DSL translation. Across all tasks, performance sharply declines as the evaluation shifts from surface-level similarity to executable correctness, exposing limitations in long-range symbolic reasoning and 3D-aware procedural synthesis. CrochetBench offers a new lens for assessing procedural competence in multimodal models and highlights the gap between surface-level understanding and executable precision in real-world creative domains. Code is available at https://github.com/Peiyu-Georgia-Li/crochetBench.

TraceTrans: Translation and Spatial Tracing for Surgical Prediction

Image-to-image translation models have achieved notable success in converting images across visual domains and are increasingly used for medical tasks such as predicting post-operative outcomes and modeling disease progression. However, most existing methods primarily aim to match the target distribution and often neglect spatial correspondences between the source and translated images. This limitation can lead to structural inconsistencies and hallucinations, undermining the reliability and interpretability of the predictions. These challenges are accentuated in clinical applications by the stringent requirement for anatomical accuracy. In this work, we present TraceTrans, a novel deformable image translation model designed for post-operative prediction that generates images aligned with the target distribution while explicitly revealing spatial correspondences with the pre-operative input. The framework employs an encoder for feature extraction and dual decoders for predicting spatial deformations and synthesizing the translated image. The predicted deformation field imposes spatial constraints on the generated output, ensuring anatomical consistency with the source. Extensive experiments on medical cosmetology and brain MRI datasets demonstrate that TraceTrans delivers accurate and interpretable post-operative predictions, highlighting its potential for reliable clinical deployment.

Building Trust in Virtual Immunohistochemistry: Automated Assessment of Image Quality

Deep learning models can generate virtual immunohistochemistry (IHC) stains from hematoxylin and eosin (H&E) images, offering a scalable and low-cost alternative to laboratory IHC. However, reliable evaluation of image quality remains a challenge as current texture- and distribution-based metrics quantify image fidelity rather than the accuracy of IHC staining. Here, we introduce an automated and accuracy grounded framework to determine image quality across sixteen paired or unpaired image translation models. Using color deconvolution, we generate masks of pixels stained brown (i.e., IHC-positive) as predicted by each virtual IHC model. We use the segmented masks of real and virtual IHC to compute stain accuracy metrics (Dice, IoU, Hausdorff distance) that directly quantify correct pixel - level labeling without needing expert manual annotations. Our results demonstrate that conventional image fidelity metrics, including Frechet Inception Distance (FID), peak signal-to-noise ratio (PSNR), and structural similarity (SSIM), correlate poorly with stain accuracy and pathologist assessment. Paired models such as PyramidPix2Pix and AdaptiveNCE achieve the highest stain accuracy, whereas unpaired diffusion- and GAN-based models are less reliable in providing accurate IHC positive pixel labels. Moreover, whole-slide images (WSI) reveal performance declines that are invisible in patch-based evaluations, emphasizing the need for WSI-level benchmarks. Together, this framework defines a reproducible approach for assessing the quality of virtual IHC models, a critical step to accelerate translation towards routine use by pathologists.

FlowRoI A Fast Optical Flow Driven Region of Interest Extraction Framework for High-Throughput Image Compression in Immune Cell Migration Analysis

Autonomous migration is essential for the function of immune cells such as neutrophils and plays a pivotal role in diverse diseases. Recently, we introduced ComplexEye, a multi-lens array microscope comprising 16 independent aberration-corrected glass lenses arranged at the pitch of a 96-well plate, capable of capturing high-resolution movies of migrating cells. This architecture enables high-throughput live-cell video microscopy for migration analysis, supporting routine quantification of autonomous motility with strong potential for clinical translation. However, ComplexEye and similar high-throughput imaging platforms generate data at an exponential rate, imposing substantial burdens on storage and transmission. To address this challenge, we present FlowRoI, a fast optical-flow-based region of interest (RoI) extraction framework designed for high-throughput image compression in immune cell migration studies. FlowRoI estimates optical flow between consecutive frames and derives RoI masks that reliably cover nearly all migrating cells. The raw image and its corresponding RoI mask are then jointly encoded using JPEG2000 to enable RoI-aware compression. FlowRoI operates with high computational efficiency, achieving runtimes comparable to standard JPEG2000 and reaching an average throughput of about 30 frames per second on a modern laptop equipped with an Intel i7-1255U CPU. In terms of image quality, FlowRoI yields higher peak signal-to-noise ratio (PSNR) in cellular regions and achieves 2.0-2.2x higher compression rates at matched PSNR compared to standard JPEG2000.

Towards Rotation-only Imaging Geometry: Rotation Estimation

Structure from Motion (SfM) is a critical task in computer vision, aiming to recover the 3D scene structure and camera motion from a sequence of 2D images. The recent pose-only imaging geometry decouples 3D coordinates from camera poses and demonstrates significantly better SfM performance through pose adjustment. Continuing the pose-only perspective, this paper explores the critical relationship between the scene structures, rotation and translation. Notably, the translation can be expressed in terms of rotation, allowing us to condense the imaging geometry representation onto the rotation manifold. A rotation-only optimization framework based on reprojection error is proposed for both two-view and multi-view scenarios. The experiment results demonstrate superior accuracy and robustness performance over the current state-of-the-art rotation estimation methods, even comparable to multiple bundle adjustment iteration results. Hopefully, this work contributes to even more accurate, efficient and reliable 3D visual computing.

Towards Metric-Aware Multi-Person Mesh Recovery by Jointly Optimizing Human Crowd in Camera Space

Multi-person human mesh recovery from a single image is a challenging task, hindered by the scarcity of in-the-wild training data. Prevailing in-the-wild human mesh pseudo-ground-truth (pGT) generation pipelines are single-person-centric, where each human is processed individually without joint optimization. This oversight leads to a lack of scene-level consistency, producing individuals with conflicting depths and scales within the same image. To address this, we introduce Depth-conditioned Translation Optimization (DTO), a novel optimization-based method that jointly refines the camera-space translations of all individuals in a crowd. By leveraging anthropometric priors on human height and depth cues from a monocular depth estimator, DTO solves for a scene-consistent placement of all subjects within a principled Maximum a posteriori (MAP) framework. Applying DTO to the 4D-Humans dataset, we construct DTO-Humans, a new large-scale pGT dataset of 0.56M high-quality, scene-consistent multi-person images, featuring dense crowds with an average of 4.8 persons per image. Furthermore, we propose Metric-Aware HMR, an end-to-end network that directly estimates human mesh and camera parameters in metric scale. This is enabled by a camera branch and a novel relative metric loss that enforces plausible relative scales. Extensive experiments demonstrate that our method achieves state-of-the-art performance on relative depth reasoning and human mesh recovery. Code and data will be released publicly.

Fractional neural attention for efficient multiscale sequence processing

Attention mechanisms underpin the computational power of Transformer models, which have achieved remarkable success across diverse domains. Yet understanding and extending the principles underlying self-attention remains a key challenge for advancing artificial intelligence. Drawing inspiration from the multiscale dynamics of biological attention and from dynamical systems theory, we introduce Fractional Neural Attention (FNA), a principled, neuroscience-inspired framework for multiscale information processing. FNA models token interactions through Lévy diffusion governed by the fractional Laplacian, intrinsically realizing simultaneous short- and long-range dependencies across multiple scales. This mechanism yields greater expressivity and faster information mixing, advancing the foundational capacity of Transformers. Theoretically, we show that FNA's dynamics are governed by the fractional diffusion equation, and that the resulting attention networks exhibit larger spectral gaps and shorter path lengths -- mechanistic signatures of enhanced computational efficiency. Empirically, FNA achieves competitive text-classification performance even with a single layer and a single head; it also improves performance in image processing and neural machine translation. Finally, the diffusion map algorithm from geometric harmonics enables dimensionality reduction of FNA weights while preserving the intrinsic structure of embeddings and hidden states. Together, these results establish FNA as a principled mechanism connecting self-attention, stochastic dynamics, and geometry, providing an interpretable, biologically grounded foundation for powerful, neuroscience-inspired AI.