Cross-domain Named Entity Recognition via Graph Matching

Cross-domain NER is a practical yet challenging problem since the data scarcity in the real-world scenario. A common practice is first to learn a NER model in a rich-resource general domain and then adapt the model to specific domains. Due to the mismatch problem between entity types across domains, the wide knowledge in the general domain can not effectively transfer to the target domain NER model. To this end, we model the label relationship as a probability distribution and construct label graphs in both source and target label spaces. To enhance the contextual representation with label structures, we fuse the label graph into the word embedding output by BERT. By representing label relationships as graphs, we formulate cross-domain NER as a graph matching problem. Furthermore, the proposed method has good applicability with pre-training methods and is potentially capable of other cross-domain prediction tasks. Empirical results on four datasets show that our method outperforms a series of transfer learning, multi-task learning, and few-shot learning methods.

FsPONER: Few-shot Prompt Optimization for Named Entity Recognition in Domain-specific Scenarios

Large Language Models (LLMs) have provided a new pathway for Named Entity Recognition (NER) tasks. Compared with fine-tuning, LLM-powered prompting methods avoid the need for training, conserve substantial computational resources, and rely on minimal annotated data. Previous studies have achieved comparable performance to fully supervised BERT-based fine-tuning approaches on general NER benchmarks. However, none of the previous approaches has investigated the efficiency of LLM-based few-shot learning in domain-specific scenarios. To address this gap, we introduce FsPONER, a novel approach for optimizing few-shot prompts, and evaluate its performance on domain-specific NER datasets, with a focus on industrial manufacturing and maintenance, while using multiple LLMs -- GPT-4-32K, GPT-3.5-Turbo, LLaMA 2-chat, and Vicuna. FsPONER consists of three few-shot selection methods based on random sampling, TF-IDF vectors, and a combination of both. We compare these methods with a general-purpose GPT-NER method as the number of few-shot examples increases and evaluate their optimal NER performance against fine-tuned BERT and LLaMA 2-chat. In the considered real-world scenarios with data scarcity, FsPONER with TF-IDF surpasses fine-tuned models by approximately 10% in F1 score.

Annotation Errors and NER: A Study with OntoNotes 5.0

Named Entity Recognition (NER) is a well-studied problem in NLP. However, there is much less focus on studying NER datasets, compared to developing new NER models. In this paper, we employed three simple techniques to detect annotation errors in the OntoNotes 5.0 corpus for English NER, which is the largest available NER corpus for English. Our techniques corrected ~10% of the sentences in train/dev/test data. In terms of entity mentions, we corrected the span and/or type of ~8% of mentions in the dataset, while adding/deleting/splitting/merging a few more. These are large numbers of changes, considering the size of OntoNotes. We used three NER libraries to train, evaluate and compare the models trained with the original and the re-annotated datasets, which showed an average improvement of 1.23% in overall F-scores, with large (>10%) improvements for some of the entity types. While our annotation error detection methods are not exhaustive and there is some manual annotation effort involved, they are largely language agnostic and can be employed with other NER datasets, and other sequence labelling tasks.

CLEANANERCorp: Identifying and Correcting Incorrect Labels in the ANERcorp Dataset

Label errors are a common issue in machine learning datasets, particularly for tasks such as Named Entity Recognition. Such label errors might hurt model training, affect evaluation results, and lead to an inaccurate assessment of model performance. In this study, we dived deep into one of the widely adopted Arabic NER benchmark datasets (ANERcorp) and found a significant number of annotation errors, missing labels, and inconsistencies. Therefore, in this study, we conducted empirical research to understand these errors, correct them and propose a cleaner version of the dataset named CLEANANERCorp. CLEANANERCorp will serve the research community as a more accurate and consistent benchmark.

DANIEL: A fast Document Attention Network for Information Extraction and Labelling of handwritten documents

Information extraction from handwritten documents involves traditionally three distinct steps: Document Layout Analysis, Handwritten Text Recognition, and Named Entity Recognition. Recent approaches have attempted to integrate these steps into a single process using fully end-to-end architectures. Despite this, these integrated approaches have not yet matched the performance of language models, when applied to information extraction in plain text. In this paper, we introduce DANIEL (Document Attention Network for Information Extraction and Labelling), a fully end-to-end architecture integrating a language model and designed for comprehensive handwritten document understanding. DANIEL performs layout recognition, handwriting recognition, and named entity recognition on full-page documents. Moreover, it can simultaneously learn across multiple languages, layouts, and tasks. For named entity recognition, the ontology to be applied can be specified via the input prompt. The architecture employs a convolutional encoder capable of processing images of any size without resizing, paired with an autoregressive decoder based on a transformer-based language model. DANIEL achieves competitive results on four datasets, including a new state-of-the-art performance on RIMES 2009 and M-POPP for Handwriting Text Recognition, and IAM NER for Named Entity Recognition. Furthermore, DANIEL is much faster than existing approaches. We provide the source code and the weights of the trained models at \url{https://github.com/Shulk97/daniel}.

Medical Spoken Named Entity Recognition

Spoken Named Entity Recognition (NER) aims to extracting named entities from speech and categorizing them into types like person, location, organization, etc. In this work, we present VietMed-NER - the first spoken NER dataset in the medical domain. To our best knowledge, our real-world dataset is the largest spoken NER dataset in the world in terms of the number of entity types, featuring 18 distinct types. Secondly, we present baseline results using various state-of-the-art pre-trained models: encoder-only and sequence-to-sequence. We found that pre-trained multilingual models XLM-R outperformed all monolingual models on both reference text and ASR output. Also in general, encoders perform better than sequence-to-sequence models for the NER task. By simply translating, the transcript is applicable not just to Vietnamese but to other languages as well. All code, data and models are made publicly available here: https://github.com/leduckhai/MultiMed

TocBERT: Medical Document Structure Extraction Using Bidirectional Transformers

Text segmentation holds paramount importance in the field of Natural Language Processing (NLP). It plays an important role in several NLP downstream tasks like information retrieval and document summarization. In this work, we propose a new solution, namely TocBERT, for segmenting texts using bidirectional transformers. TocBERT represents a supervised solution trained on the detection of titles and sub-titles from their semantic representations. This task was formulated as a named entity recognition (NER) problem. The solution has been applied on a medical text segmentation use-case where the Bio-ClinicalBERT model is fine-tuned to segment discharge summaries of the MIMIC-III dataset. The performance of TocBERT has been evaluated on a human-labeled ground truth corpus of 250 notes. It achieved an F1-score of 84.6% when evaluated on a linear text segmentation problem and 72.8% on a hierarchical text segmentation problem. It outperformed a carefully designed rule-based solution, particularly in distinguishing titles from subtitles.

Retrieval Augmented Instruction Tuning for Open NER with Large Language Models

The strong capability of large language models (LLMs) has been applied to information extraction (IE) through either retrieval augmented prompting or instruction tuning (IT). However, the best way to incorporate information with LLMs for IE remains an open question. In this paper, we explore Retrieval Augmented Instruction Tuning (RA-IT) for IE, focusing on the task of open named entity recognition (NER). Specifically, for each training sample, we retrieve semantically similar examples from the training dataset as the context and prepend them to the input of the original instruction. To evaluate our RA-IT approach more thoroughly, we construct a Chinese IT dataset for open NER and evaluate RA-IT in both English and Chinese scenarios. Experimental results verify the effectiveness of RA-IT across various data sizes and in both English and Chinese scenarios. We also conduct thorough studies to explore the impacts of various retrieval strategies in the proposed RA-IT framework. Code and data are available at: https://github.com/Emma1066/Retrieval-Augmented-IT-OpenNER

BioMNER: A Dataset for Biomedical Method Entity Recognition

Named entity recognition (NER) stands as a fundamental and pivotal task within the realm of Natural Language Processing. Particularly within the domain of Biomedical Method NER, this task presents notable challenges, stemming from the continual influx of domain-specific terminologies in scholarly literature. Current research in Biomedical Method (BioMethod) NER suffers from a scarcity of resources, primarily attributed to the intricate nature of methodological concepts, which necessitate a profound understanding for precise delineation. In this study, we propose a novel dataset for biomedical method entity recognition, employing an automated BioMethod entity recognition and information retrieval system to assist human annotation. Furthermore, we comprehensively explore a range of conventional and contemporary open-domain NER methodologies, including the utilization of cutting-edge large-scale language models (LLMs) customised to our dataset. Our empirical findings reveal that the large parameter counts of language models surprisingly inhibit the effective assimilation of entity extraction patterns pertaining to biomedical methods. Remarkably, the approach, leveraging the modestly sized ALBERT model (only 11MB), in conjunction with conditional random fields (CRF), achieves state-of-the-art (SOTA) performance.

Bridging the Gap: Transfer Learning from English PLMs to Malaysian English

Malaysian English is a low resource creole language, where it carries the elements of Malay, Chinese, and Tamil languages, in addition to Standard English. Named Entity Recognition (NER) models underperform when capturing entities from Malaysian English text due to its distinctive morphosyntactic adaptations, semantic features and code-switching (mixing English and Malay). Considering these gaps, we introduce MENmBERT and MENBERT, a pre-trained language model with contextual understanding, specifically tailored for Malaysian English. We have fine-tuned MENmBERT and MENBERT using manually annotated entities and relations from the Malaysian English News Article (MEN) Dataset. This fine-tuning process allows the PLM to learn representations that capture the nuances of Malaysian English relevant for NER and RE tasks. MENmBERT achieved a 1.52\% and 26.27\% improvement on NER and RE tasks respectively compared to the bert-base-multilingual-cased model. Although the overall performance of NER does not have a significant improvement, our further analysis shows that there is a significant improvement when evaluated by the 12 entity labels. These findings suggest that pre-training language models on language-specific and geographically-focused corpora can be a promising approach for improving NER performance in low-resource settings. The dataset and code published in this paper provide valuable resources for NLP research work focusing on Malaysian English.