From Field to Drone: Domain Drift Tolerant Automated Multi-Species and Damage Plant Semantic Segmentation for Herbicide Trials

Field trials are vital in herbicide research and development to assess effects on crops and weeds under varied conditions. Traditionally, evaluations rely on manual visual assessments, which are time-consuming, labor-intensive, and subjective. Automating species and damage identification is challenging due to subtle visual differences, but it can greatly enhance efficiency and consistency. We present an improved segmentation model combining a general-purpose self-supervised visual model with hierarchical inference based on botanical taxonomy. Trained on a multi-year dataset (2018-2020) from Germany and Spain using digital and mobile cameras, the model was tested on digital camera data (year 2023) and drone imagery from the United States, Germany, and Spain (year 2024) to evaluate robustness under domain shift. This cross-device evaluation marks a key step in assessing generalization across platforms of the model. Our model significantly improved species identification (F1-score: 0.52 to 0.85, R-squared: 0.75 to 0.98) and damage classification (F1-score: 0.28 to 0.44, R-squared: 0.71 to 0.87) over prior methods. Under domain shift (drone images), it maintained strong performance with moderate degradation (species: F1-score 0.60, R-squared 0.80; damage: F1-score 0.41, R-squared 0.62), where earlier models failed. These results confirm the model's robustness and real-world applicability. It is now deployed in BASF's phenotyping pipeline, enabling large-scale, automated crop and weed monitoring across diverse geographies.

TerraMAE: Learning Spatial-Spectral Representations from Hyperspectral Earth Observation Data via Adaptive Masked Autoencoders

Hyperspectral satellite imagery offers sub-30 m views of Earth in hundreds of contiguous spectral bands, enabling fine-grained mapping of soils, crops, and land cover. While self-supervised Masked Autoencoders excel on RGB and low-band multispectral data, they struggle to exploit the intricate spatial-spectral correlations in 200+ band hyperspectral images. We introduce TerraMAE, a novel HSI encoding framework specifically designed to learn highly representative spatial-spectral embeddings for diverse geospatial analyses. TerraMAE features an adaptive channel grouping strategy, based on statistical reflectance properties to capture spectral similarities, and an enhanced reconstruction loss function that incorporates spatial and spectral quality metrics. We demonstrate TerraMAE's effectiveness through superior spatial-spectral information preservation in high-fidelity image reconstruction. Furthermore, we validate its practical utility and the quality of its learned representations through strong performance on three key downstream geospatial tasks: crop identification, land cover classification, and soil texture prediction.

Object-Centric Cropping for Visual Few-Shot Classification

In the domain of Few-Shot Image Classification, operating with as little as one example per class, the presence of image ambiguities stemming from multiple objects or complex backgrounds can significantly deteriorate performance. Our research demonstrates that incorporating additional information about the local positioning of an object within its image markedly enhances classification across established benchmarks. More importantly, we show that a significant fraction of the improvement can be achieved through the use of the Segment Anything Model, requiring only a pixel of the object of interest to be pointed out, or by employing fully unsupervised foreground object extraction methods.

Crop Pest Classification Using Deep Learning Techniques: A Review

Insect pests continue to bring a serious threat to crop yields around the world, and traditional methods for monitoring them are often slow, manual, and difficult to scale. In recent years, deep learning has emerged as a powerful solution, with techniques like convolutional neural networks (CNNs), vision transformers (ViTs), and hybrid models gaining popularity for automating pest detection. This review looks at 37 carefully selected studies published between 2018 and 2025, all focused on AI-based pest classification. The selected research is organized by crop type, pest species, model architecture, dataset usage, and key technical challenges. The early studies relied heavily on CNNs but latest work is shifting toward hybrid and transformer-based models that deliver higher accuracy and better contextual understanding. Still, challenges like imbalanced datasets, difficulty in detecting small pests, limited generalizability, and deployment on edge devices remain significant hurdles. Overall, this review offers a structured overview of the field, highlights useful datasets, and outlines the key challenges and future directions for AI-based pest monitoring systems.

Neural Network-based Study for Rice Leaf Disease Recognition and Classification: A Comparative Analysis Between Feature-based Model and Direct Imaging Model

Rice leaf diseases significantly reduce productivity and cause economic losses, highlighting the need for early detection to enable effective management and improve yields. This study proposes Artificial Neural Network (ANN)-based image-processing techniques for timely classification and recognition of rice diseases. Despite the prevailing approach of directly inputting images of rice leaves into ANNs, there is a noticeable absence of thorough comparative analysis between the Feature Analysis Detection Model (FADM) and Direct Image-Centric Detection Model (DICDM), specifically when it comes to evaluating the effectiveness of Feature Extraction Algorithms (FEAs). Hence, this research presents initial experiments on the Feature Analysis Detection Model, utilizing various image Feature Extraction Algorithms, Dimensionality Reduction Algorithms (DRAs), Feature Selection Algorithms (FSAs), and Extreme Learning Machine (ELM). The experiments are carried out on datasets encompassing bacterial leaf blight, brown spot, leaf blast, leaf scald, Sheath blight rot, and healthy leaf, utilizing 10-fold Cross-Validation method. A Direct Image-Centric Detection Model is established without the utilization of any FEA, and the evaluation of classification performance relies on different metrics. Ultimately, an exhaustive contrast is performed between the achievements of the Feature Analysis Detection Model and Direct Image-Centric Detection Model in classifying rice leaf diseases. The results reveal that the highest performance is attained using the Feature Analysis Detection Model. The adoption of the proposed Feature Analysis Detection Model for detecting rice leaf diseases holds excellent potential for improving crop health, minimizing yield losses, and enhancing overall productivity and sustainability of rice farming.

Fine-grained Hierarchical Crop Type Classification from Integrated Hyperspectral EnMAP Data and Multispectral Sentinel-2 Time Series: A Large-scale Dataset and Dual-stream Transformer Method

Fine-grained crop type classification serves as the fundamental basis for large-scale crop mapping and plays a vital role in ensuring food security. It requires simultaneous capture of both phenological dynamics (obtained from multi-temporal satellite data like Sentinel-2) and subtle spectral variations (demanding nanometer-scale spectral resolution from hyperspectral imagery). Research combining these two modalities remains scarce currently due to challenges in hyperspectral data acquisition and crop types annotation costs. To address these issues, we construct a hierarchical hyperspectral crop dataset (H2Crop) by integrating 30m-resolution EnMAP hyperspectral data with Sentinel-2 time series. With over one million annotated field parcels organized in a four-tier crop taxonomy, H2Crop establishes a vital benchmark for fine-grained agricultural crop classification and hyperspectral image processing. We propose a dual-stream Transformer architecture that synergistically processes these modalities. It coordinates two specialized pathways: a spectral-spatial Transformer extracts fine-grained signatures from hyperspectral EnMAP data, while a temporal Swin Transformer extracts crop growth patterns from Sentinel-2 time series. The designed hierarchical classification head with hierarchical fusion then simultaneously delivers multi-level crop type classification across all taxonomic tiers. Experiments demonstrate that adding hyperspectral EnMAP data to Sentinel-2 time series yields a 4.2% average F1-scores improvement (peaking at 6.3%). Extensive comparisons also confirm our method's higher accuracy over existing deep learning approaches for crop type classification and the consistent benefits of hyperspectral data across varying temporal windows and crop change scenarios. Codes and dataset are available at https://github.com/flyakon/H2Crop.

A Novel Large-scale Crop Dataset and Dual-stream Transformer Method for Fine-grained Hierarchical Crop Classification from Integrated Hyperspectral EnMAP Data and Multispectral Sentinel-2 Time Series

Fine-grained crop classification is crucial for precision agriculture and food security monitoring. It requires simultaneous capture of both phenological dynamics (obtained from multi-temporal satellite data like Sentinel-2) and subtle spectral variations (demanding nanometer-scale spectral resolution from hyperspectral imagery). Research combining these two modalities remains scarce currently due to challenges in hyperspectral data acquisition and crop types annotation costs. To address these issues, we construct a hierarchical hyperspectral crop dataset (H2Crop) by integrating 30m-resolution EnMAP hyperspectral data with Sentinel-2 time series. With over one million annotated field parcels organized in a four-tier crop taxonomy, H2Crop establishes a vital benchmark for fine-grained agricultural crop classification and hyperspectral image processing. We propose a dual-stream Transformer architecture that synergistically processes these modalities. It coordinates two specialized pathways: a spectral-spatial Transformer extracts fine-grained signatures from hyperspectral EnMAP data, while a temporal Swin Transformer extracts crop growth patterns from Sentinel-2 time series. The designed hierarchy classification heads with hierarchical fusion then simultaneously delivers multi-level classification across all taxonomic tiers. Experiments demonstrate that adding hyperspectral EnMAP data to Sentinel-2 time series yields a 4.2% average F1-scores improvement (peaking at 6.3%). Extensive comparisons also confirming our method's higher accuracy over existing deep learning approaches for crop type classification and the consistent benefits of hyperspectral data across varying temporal windows and crop change scenarios. Codes and dataset will be available at https://github.com/flyakon/H2Crop and www.glass.hku.hk Keywords: Crop type classification, precision agriculture, remote sensing, deep learning, hyperspectral data, Sentinel-2 time series, fine-grained crops

From Rows to Yields: How Foundation Models for Tabular Data Simplify Crop Yield Prediction

We present an application of a foundation model for small- to medium-sized tabular data (TabPFN), to sub-national yield forecasting task in South Africa. TabPFN has recently demonstrated superior performance compared to traditional machine learning (ML) models in various regression and classification tasks. We used the dekadal (10-days) time series of Earth Observation (EO; FAPAR and soil moisture) and gridded weather data (air temperature, precipitation and radiation) to forecast the yield of summer crops at the sub-national level. The crop yield data was available for 23 years and for up to 8 provinces. Covariate variables for TabPFN (i.e., EO and weather) were extracted by region and aggregated at a monthly scale. We benchmarked the results of the TabPFN against six ML models and three baseline models. Leave-one-year-out cross-validation experiment setting was used in order to ensure the assessment of the models capacity to forecast an unseen year. Results showed that TabPFN and ML models exhibit comparable accuracy, outperforming the baselines. Nonetheless, TabPFN demonstrated superior practical utility due to its significantly faster tuning time and reduced requirement for feature engineering. This renders TabPFN a more viable option for real-world operation yield forecasting applications, where efficiency and ease of implementation are paramount.

Model-Agnostic, Temperature-Informed Sampling Enhances Cross-Year Crop Mapping with Deep Learning

Conventional benchmarks for crop type classification from optical satellite time series typically assume access to labeled data from the same year and rely on fixed calendar-day sampling. This limits generalization across seasons, where crop phenology shifts due to interannual climate variability, and precludes real-time application when current-year labels are unavailable. Furthermore, uncertainty quantification is often neglected, making such approaches unreliable for crop monitoring applications. Inspired by ecophysiological principles of plant growth, we propose a simple, model-agnostic sampling strategy that leverages growing degree days (GDD), based on daily average temperature, to replace calendar time with thermal time. By uniformly subsampling time series in this biologically meaningful domain, the method emphasizes phenologically active growth stages while reducing temporal redundancy and noise. We evaluate the method on a multi-year Sentinel-2 dataset spanning all of Switzerland, training on one growing season and testing on other seasons. Compared to state-of-the-art baselines, our method delivers substantial gains in classification accuracy and, critically, produces more calibrated uncertainty estimates. Notably, our method excels in low-data regimes and enables significantly more accurate early-season classification. With only 10 percent of the training data, our method surpasses the state-of-the-art baseline in both predictive accuracy and uncertainty estimation, and by the end of June, it achieves performance similar to a baseline trained on the full season. These results demonstrate that leveraging temperature data not only improves predictive performance across seasons but also enhances the robustness and trustworthiness of crop-type mapping in real-world applications.

Loss-Guided Model Sharing and Local Learning Correction in Decentralized Federated Learning for Crop Disease Classification

Crop disease detection and classification is a critical challenge in agriculture, with major implications for productivity, food security, and environmental sustainability. While deep learning models such as CNN and ViT have shown excellent performance in classifying plant diseases from images, their large-scale deployment is often limited by data privacy concerns. Federated Learning (FL) addresses this issue, but centralized FL remains vulnerable to single-point failures and scalability limits. In this paper, we introduce a novel Decentralized Federated Learning (DFL) framework that uses validation loss (Loss_val) both to guide model sharing between peers and to correct local training via an adaptive loss function controlled by weighting parameter. We conduct extensive experiments using PlantVillage datasets with three deep learning architectures (ResNet50, VGG16, and ViT_B16), analyzing the impact of weighting parameter, the number of shared models, the number of clients, and the use of Loss_val versus Loss_train of other clients. Results demonstrate that our DFL approach not only improves accuracy and convergence speed, but also ensures better generalization and robustness across heterogeneous data environments making it particularly well-suited for privacy-preserving agricultural applications.