Hypothesis testing is a statistical method used to draw conclusions about populations from sample data, typically represented in tables. With the prevalence of graph representations in real-life applications, hypothesis testing in graphs is gaining importance. In this work, we formalize node, edge, and path hypotheses in attributed graphs. We develop a sampling-based hypothesis testing framework, which can accommodate existing hypothesis-agnostic graph sampling methods. To achieve accurate and efficient sampling, we then propose a Path-Hypothesis-Aware SamplEr, PHASE, an m- dimensional random walk that accounts for the paths specified in a hypothesis. We further optimize its time efficiency and propose PHASEopt. Experiments on real datasets demonstrate the ability of our framework to leverage common graph sampling methods for hypothesis testing, and the superiority of hypothesis-aware sampling in terms of accuracy and time efficiency.
Tabular neural network (NN) has attracted remarkable attentions and its recent advances have gradually narrowed the performance gap with respect to tree-based models on many public datasets. While the mainstreams focus on calibrating NN to fit tabular data, we emphasize the importance of homogeneous embeddings and alternately concentrate on regularizing tabular inputs through supervised pretraining. Specifically, we extend a recent work (DeepTLF) and utilize the structure of pretrained tree ensembles to transform raw variables into a single vector (T2V), or an array of tokens (T2T). Without loss of space efficiency, these binarized embeddings can be consumed by canonical tabular NN with fully-connected or attention-based building blocks. Through quantitative experiments on 88 OpenML datasets with binary classification task, we validated that the proposed tree-regularized representation not only tapers the difference with respect to tree-based models, but also achieves on-par and better performance when compared with advanced NN models. Most importantly, it possesses better robustness and can be easily scaled and generalized as standalone encoder for tabular modality. Codes: https://github.com/milanlx/tree-regularized-embedding.
This paper provides a comprehensive review of the latest advancements in fetal motion correction in MRI. We delve into various contemporary methodologies and technological advancements aimed at overcoming these challenges. It includes traditional 3D fetal MRI correction methods like Slice to Volume Registration (SVR), deep learning-based techniques such as Convolutional Neural Networks (CNNs), Long Short-Term Memory (LSTM) Networks, Transformers, Generative Adversarial Networks (GANs) and most recent advancements of Diffusion Models. The insights derived from this literature review reflect a thorough understanding of both the technical intricacies and practical implications of fetal motion in MRI studies, offering a reasoned perspective on potential solutions and future improvements in this field.
We propose a multi-task learning (MTL) model for jointly performing three tasks that are commonly solved in a text-to-speech (TTS) front-end: text normalization (TN), part-of-speech (POS) tagging, and homograph disambiguation (HD). Our framework utilizes a tree-like structure with a trunk that learns shared representations, followed by separate task-specific heads. We further incorporate a pre-trained language model to utilize its built-in lexical and contextual knowledge, and study how to best use its embeddings so as to most effectively benefit our multi-task model. Through task-wise ablations, we show that our full model trained on all three tasks achieves the strongest overall performance compared to models trained on individual or sub-combinations of tasks, confirming the advantages of our MTL framework. Finally, we introduce a new HD dataset containing a balanced number of sentences in diverse contexts for a variety of homographs and their pronunciations. We demonstrate that incorporating this dataset into training significantly improves HD performance over only using a commonly used, but imbalanced, pre-existing dataset.
The recent trend of large language models (LLMs) is to increase the scale of both model size (\aka the number of parameters) and dataset to achieve better generative ability, which is definitely proved by a lot of work such as the famous GPT and Llama. However, large models often involve massive computational costs, and practical applications cannot afford such high prices. However, the method of constructing a strong model architecture for LLMs is rarely discussed. We first analyze the state-of-the-art language model architectures and observe the feature collapse problem. Based on the theoretical analysis, we propose that the nonlinearity is also very important for language models, which is usually studied in convolutional neural networks for vision tasks. The series informed activation function is then introduced with tiny calculations that can be ignored, and an augmented shortcut is further used to enhance the model nonlinearity. We then demonstrate that the proposed approach is significantly effective for enhancing the model nonlinearity through carefully designed ablations; thus, we present a new efficient model architecture for establishing modern, namely, PanGu-$\pi$. Experiments are then conducted using the same dataset and training strategy to compare PanGu-$\pi$ with state-of-the-art LLMs. The results show that PanGu-$\pi$-7B can achieve a comparable performance to that of benchmarks with about 10\% inference speed-up, and PanGu-$\pi$-1B can achieve state-of-the-art performance in terms of accuracy and efficiency. In addition, we have deployed PanGu-$\pi$-7B in the high-value domains of finance and law, developing an LLM named YunShan for practical application. The results show that YunShan can surpass other models with similar scales on benchmarks.
In this paper, we introduce Recon3DMind, a groundbreaking task focused on reconstructing 3D visuals from Functional Magnetic Resonance Imaging (fMRI) signals. This represents a major step forward in cognitive neuroscience and computer vision. To support this task, we present the fMRI-Shape dataset, utilizing 360-degree view videos of 3D objects for comprehensive fMRI signal capture. Containing 55 categories of common objects from daily life, this dataset will bolster future research endeavors. We also propose MinD-3D, a novel and effective three-stage framework that decodes and reconstructs the brain's 3D visual information from fMRI signals. This method starts by extracting and aggregating features from fMRI frames using a neuro-fusion encoder, then employs a feature bridge diffusion model to generate corresponding visual features, and ultimately recovers the 3D object through a generative transformer decoder. Our experiments demonstrate that this method effectively extracts features that are valid and highly correlated with visual regions of interest (ROIs) in fMRI signals. Notably, it not only reconstructs 3D objects with high semantic relevance and spatial similarity but also significantly deepens our understanding of the human brain's 3D visual processing capabilities. Project page at: https://jianxgao.github.io/MinD-3D.
Large Language Models (LLMs) have demonstrated considerable advances, and several claims have been made about their exceeding human performance. However, in real-world tasks, domain knowledge is often required. Low-resource learning methods like Active Learning (AL) have been proposed to tackle the cost of domain expert annotation, raising this question: Can LLMs surpass compact models trained with expert annotations in domain-specific tasks? In this work, we conduct an empirical experiment on four datasets from three different domains comparing SOTA LLMs with small models trained on expert annotations with AL. We found that small models can outperform GPT-3.5 with a few hundreds of labeled data, and they achieve higher or similar performance with GPT-4 despite that they are hundreds time smaller. Based on these findings, we posit that LLM predictions can be used as a warmup method in real-world applications and human experts remain indispensable in tasks involving data annotation driven by domain-specific knowledge.
The exploration of brain activity and its decoding from fMRI data has been a longstanding pursuit, driven by its potential applications in brain-computer interfaces, medical diagnostics, and virtual reality. Previous approaches have primarily focused on individual subject analysis, highlighting the need for a more universal and adaptable framework, which is the core motivation behind our work. In this work, we propose fMRI-PTE, an innovative auto-encoder approach for fMRI pre-training, with a focus on addressing the challenges of varying fMRI data dimensions due to individual brain differences. Our approach involves transforming fMRI signals into unified 2D representations, ensuring consistency in dimensions and preserving distinct brain activity patterns. We introduce a novel learning strategy tailored for pre-training 2D fMRI images, enhancing the quality of reconstruction. fMRI-PTE's adaptability with image generators enables the generation of well-represented fMRI features, facilitating various downstream tasks, including within-subject and cross-subject brain activity decoding. Our contributions encompass introducing fMRI-PTE, innovative data transformation, efficient training, a novel learning strategy, and the universal applicability of our approach. Extensive experiments validate and support our claims, offering a promising foundation for further research in this domain.
Data visualization is a powerful tool for exploring and communicating insights in various domains. To automate visualization choice for datasets, a task known as visualization recommendation has been proposed. Various machine-learning-based approaches have been developed for this purpose, but they often require a large corpus of dataset-visualization pairs for training and lack natural explanations for their results. To address this research gap, we propose LLM4Vis, a novel ChatGPT-based prompting approach to perform visualization recommendation and return human-like explanations using very few demonstration examples. Our approach involves feature description, demonstration example selection, explanation generation, demonstration example construction, and inference steps. To obtain demonstration examples with high-quality explanations, we propose a new explanation generation bootstrapping to iteratively refine generated explanations by considering the previous generation and template-based hint. Evaluations on the VizML dataset show that LLM4Vis outperforms or performs similarly to supervised learning models like Random Forest, Decision Tree, and MLP in both few-shot and zero-shot settings. The qualitative evaluation also shows the effectiveness of explanations generated by LLM4Vis. We make our code publicly available at \href{https://github.com/demoleiwang/LLM4Vis}{https://github.com/demoleiwang/LLM4Vis}.