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BigBIO: A Framework for Data-Centric Biomedical Natural Language Processing


Jun 30, 2022
Jason Alan Fries, Leon Weber, Natasha Seelam, Gabriel Altay, Debajyoti Datta, Samuele Garda, Myungsun Kang, Ruisi Su, Wojciech Kusa, Samuel Cahyawijaya, Fabio Barth, Simon Ott, Matthias Samwald, Stephen Bach, Stella Biderman, Mario Sänger, Bo Wang, Alison Callahan, Daniel León Periñán, Théo Gigant, Patrick Haller, Jenny Chim, Jose David Posada, John Michael Giorgi, Karthik Rangasai Sivaraman, Marc Pàmies, Marianna Nezhurina, Robert Martin, Michael Cullan, Moritz Freidank, Nathan Dahlberg, Shubhanshu Mishra, Shamik Bose, Nicholas Michio Broad, Yanis Labrak, Shlok S Deshmukh, Sid Kiblawi, Ayush Singh, Minh Chien Vu, Trishala Neeraj, Jonas Golde, Albert Villanova del Moral, Benjamin Beilharz

* Submitted to NeurIPS 2022 Datasets and Benchmarks Track 

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A global analysis of metrics used for measuring performance in natural language processing


Apr 25, 2022
Kathrin Blagec, Georg Dorffner, Milad Moradi, Simon Ott, Matthias Samwald

* "NLP Power" workshop at ACL 2022. This work is based on a previous arXiv submission: arXiv:2008.02577 [cs.AI] 

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Mapping global dynamics of benchmark creation and saturation in artificial intelligence


Mar 09, 2022
Adriano Barbosa-Silva, Simon Ott, Kathrin Blagec, Jan Brauner, Matthias Samwald


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Deep Learning, Natural Language Processing, and Explainable Artificial Intelligence in the Biomedical Domain


Mar 07, 2022
Milad Moradi, Matthias Samwald


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Benchmark datasets driving artificial intelligence development fail to capture the needs of medical professionals


Jan 18, 2022
Kathrin Blagec, Jakob Kraiger, Wolfgang Frühwirt, Matthias Samwald


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Improving the robustness and accuracy of biomedical language models through adversarial training


Nov 16, 2021
Milad Moradi, Matthias Samwald


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A curated, ontology-based, large-scale knowledge graph of artificial intelligence tasks and benchmarks


Oct 06, 2021
Kathrin Blagec, Adriano Barbosa-Silva, Simon Ott, Matthias Samwald


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SAFRAN: An interpretable, rule-based link prediction method outperforming embedding models


Sep 16, 2021
Simon Ott, Christian Meilicke, Matthias Samwald


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GPT-3 Models are Poor Few-Shot Learners in the Biomedical Domain


Sep 06, 2021
Milad Moradi, Kathrin Blagec, Florian Haberl, Matthias Samwald


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Deep learning models are not robust against noise in clinical text


Aug 27, 2021
Milad Moradi, Kathrin Blagec, Matthias Samwald


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