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Machine Learning Applications for Therapeutic Tasks with Genomics Data


May 03, 2021
Kexin Huang, Cao Xiao, Lucas M. Glass, Cathy W. Critchlow, Greg Gibson, Jimeng Sun


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HINT: Hierarchical Interaction Network for Trial Outcome Prediction Leveraging Web Data


Feb 08, 2021
Tianfan Fu, Kexin Huang, Cao Xiao, Lucas M. Glass, Jimeng Sun


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STELAR: Spatio-temporal Tensor Factorization with Latent Epidemiological Regularization


Dec 08, 2020
Nikos Kargas, Cheng Qian, Nicholas D. Sidiropoulos, Cao Xiao, Lucas M. Glass, Jimeng Sun


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FLANNEL: Focal Loss Based Neural Network Ensemble for COVID-19 Detection


Oct 30, 2020
Zhi Qiao, Austin Bae, Lucas M. Glass, Cao Xiao, Jimeng Sun


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UNITE: Uncertainty-based Health Risk Prediction Leveraging Multi-sourced Data


Oct 22, 2020
Chacha Chen, Junjie Liang, Fenglong Ma, Lucas M. Glass, Jimeng Sun, Cao Xiao


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MolDesigner: Interactive Design of Efficacious Drugs with Deep Learning


Oct 05, 2020
Kexin Huang, Tianfan Fu, Dawood Khan, Ali Abid, Ali Abdalla, Abubakar Abid, Lucas M. Glass, Marinka Zitnik, Cao Xiao, Jimeng Sun

* NeurIPS 2020 Demonstration Track 

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MIMOSA: Multi-constraint Molecule Sampling for Molecule Optimization


Oct 05, 2020
Tianfan Fu, Cao Xiao, Xinhao Li, Lucas M. Glass, Jimeng Sun


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SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summarization


Oct 04, 2020
Yue Yu, Kexin Huang, Chao Zhang, Lucas M. Glass, Jimeng Sun, Cao Xiao


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COMPOSE: Cross-Modal Pseudo-Siamese Network for Patient Trial Matching


Jun 15, 2020
Junyi Gao, Cao Xiao, Lucas M. Glass, Jimeng Sun

* Accepted by KDD'20 

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CLARA: Clinical Report Auto-completion


Mar 04, 2020
Siddharth Biswal, Cao Xiao, Lucas M. Glass, M. Brandon Westover, Jimeng Sun


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StageNet: Stage-Aware Neural Networks for Health Risk Prediction


Jan 24, 2020
Junyi Gao, Cao Xiao, Yasha Wang, Wen Tang, Lucas M. Glass, Jimeng Sun


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DeepEnroll: Patient-Trial Matching with Deep Embedding and Entailment Prediction


Jan 23, 2020
Xingyao Zhang, Cao Xiao, Lucas M. Glass, Jimeng Sun

* accepted by The World Wide Web Conference 2020 

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CONAN: Complementary Pattern Augmentation for Rare Disease Detection


Nov 26, 2019
Limeng Cui, Siddharth Biswal, Lucas M. Glass, Greg Lever, Jimeng Sun, Cao Xiao


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Doctor2Vec: Dynamic Doctor Representation Learning for Clinical Trial Recruitment


Nov 23, 2019
Siddharth Biswal, Cao Xiao, Lucas M. Glass, Elizabeth Milkovits, Jimeng Sun

* Accepted by AAAI 2020 

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CASTER: Predicting Drug Interactions with Chemical Substructure Representation


Nov 20, 2019
Kexin Huang, Cao Xiao, Trong Nghia Hoang, Lucas M. Glass, Jimeng Sun

* Accepted by AAAI 2020 

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