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A persistent homology-based topological loss function for multi-class CNN segmentation of cardiac MRI


Aug 21, 2020
Nick Byrne, James R. Clough, Giovanni Montana, Andrew P. King

* To be presented at the STACOM workshop at MICCAI 2020 

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Interpretable Deep Models for Cardiac Resynchronisation Therapy Response Prediction


Jul 09, 2020
Esther Puyol-Ant贸n, Chen Chen, James R. Clough, Bram Ruijsink, Baldeep S. Sidhu, Justin Gould, Bradley Porter, Mark Elliott, Vishal Mehta, Daniel Rueckert, Christopher A. Rinaldi, Andrew P. King

* MICCAI 2020 conference 

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Deep Learning Based Detection and Correction of Cardiac MR Motion Artefacts During Reconstruction for High-Quality Segmentation


Oct 21, 2019
Ilkay Oksuz, James R. Clough, Bram Ruijsink, Esther Puyol Anton, Aurelien Bustin, Gastao Cruz, Claudia Prieto, Andrew P. King, Julia A. Schnabel


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A Topological Loss Function for Deep-Learning based Image Segmentation using Persistent Homology


Oct 04, 2019
James R. Clough, Ilkay Oksuz, Nicholas Byrne, Veronika A. Zimmer, Julia A. Schnabel, Andrew P. King

* 12 pages, 12 figures 

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dAUTOMAP: decomposing AUTOMAP to achieve scalability and enhance performance


Sep 25, 2019
Jo Schlemper, Ilkay Oksuz, James R. Clough, Jinming Duan, Andrew P. King, Julia A. Schnabel, Joseph V. Hajnal, Daniel Rueckert

* Presented at ISMRM 27th Annual Meeting & Exhibition (Abstract #658) 

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Self-supervised Recurrent Neural Network for 4D Abdominal and In-utero MR Imaging


Aug 28, 2019
Tong Zhang, Laurence H. Jackson, Alena Uus, James R. Clough, Lisa Story, Mary A. Rutherford, Joseph V. Hajnal, Maria Deprez

* Accepted by MICCAI 2019 workshop on Machine Learning for Medical Image Reconstruction 

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Topology-preserving augmentation for CNN-based segmentation of congenital heart defects from 3D paediatric CMR


Aug 23, 2019
Nick Byrne, James R. Clough, Isra Valverde, Giovanni Montana, Andrew P. King

* To be published at MICCAI PIPPI 2019 

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Assessing the Impact of Blood Pressure on Cardiac Function Using Interpretable Biomarkers and Variational Autoencoders


Aug 13, 2019
Esther Puyol-Ant贸n, Bram Ruijsink, James R. Clough, Ilkay Oksuz, Daniel Rueckert, Reza Razavi, Andrew P. King


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Global and Local Interpretability for Cardiac MRI Classification


Jun 14, 2019
James R. Clough, Ilkay Oksuz, Esther Puyol-Anton, Bram Ruijsink, Andrew P. King, Julia A. Schnabel

* Accepted at MICCAI 2019, 8 pages, 3 figures 

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Mechanically Powered Motion Imaging Phantoms: Proof of Concept


May 17, 2019
Alberto Gomez, Cornelia Schmitz, Markus Henningsson, James Housden, Yohan Noh, Veronika A. Zimmer, James R. Clough, Ilkay Oksuz, Nicolas Toussaint, Andrew P. King, Julia A. Schnabel

* Accepted for publication at IEEE EMBC (41st International Engineering in Medicine and Biology Conference) 2019 

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Explicit topological priors for deep-learning based image segmentation using persistent homology


Jan 29, 2019
James R. Clough, Ilkay Oksuz, Nicholas Byrne, Julia A. Schnabel, Andrew P. King

* 12 pages 

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