Automated analysis of clinical notes is attracting increasing attention. However, there has not been much work on medical term abbreviation disambiguation. Such abbreviations are abundant, and highly ambiguous, in clinical documents. One of the main obstacles is the lack of large scale, balance labeled data sets. To address the issue, we propose a few-shot learning approach to take advantage of limited labeled data. Specifically, a neural topic-attention model is applied to learn improved contextualized sentence representations for medical term abbreviation disambiguation. Another vital issue is that the existing scarce annotations are noisy and missing. We re-examine and correct an existing dataset for training and collect a test set to evaluate the models fairly especially for rare senses. We train our model on the training set which contains 30 abbreviation terms as categories (on average, 479 samples and 3.24 classes in each term) selected from a public abbreviation disambiguation dataset, and then test on a manually-created balanced dataset (each class in each term has 15 samples). We show that enhancing the sentence representation with topic information improves the performance on small-scale unbalanced training datasets by a large margin, compared to a number of baseline models.
We present CoSQL, a corpus for building cross-domain, general-purpose database (DB) querying dialogue systems. It consists of 30k+ turns plus 10k+ annotated SQL queries, obtained from a Wizard-of-Oz (WOZ) collection of 3k dialogues querying 200 complex DBs spanning 138 domains. Each dialogue simulates a real-world DB query scenario with a crowd worker as a user exploring the DB and a SQL expert retrieving answers with SQL, clarifying ambiguous questions, or otherwise informing of unanswerable questions. When user questions are answerable by SQL, the expert describes the SQL and execution results to the user, hence maintaining a natural interaction flow. CoSQL introduces new challenges compared to existing task-oriented dialogue datasets:(1) the dialogue states are grounded in SQL, a domain-independent executable representation, instead of domain-specific slot-value pairs, and (2) because testing is done on unseen databases, success requires generalizing to new domains. CoSQL includes three tasks: SQL-grounded dialogue state tracking, response generation from query results, and user dialogue act prediction. We evaluate a set of strong baselines for each task and show that CoSQL presents significant challenges for future research. The dataset, baselines, and leaderboard will be released at https://yale-lily.github.io/cosql.
We focus on the cross-domain context-dependent text-to-SQL generation task. Based on the observation that adjacent natural language questions are often linguistically dependent and their corresponding SQL queries tend to overlap, we utilize the interaction history by editing the previous predicted query to improve the generation quality. Our editing mechanism views SQL as sequences and reuses generation results at the token level in a simple manner. It is flexible to change individual tokens and robust to error propagation. Furthermore, to deal with complex table structures in different domains, we employ an utterance-table encoder and a table-aware decoder to incorporate the context of the user utterance and the table schema. We evaluate our approach on the SParC dataset and demonstrate the benefit of editing compared with the state-of-the-art baselines which generate SQL from scratch. Our code is available at https://github.com/ryanzhumich/sparc_atis_pytorch.
This overview describes the official results of the CL-SciSumm Shared Task 2018 -- the first medium-scale shared task on scientific document summarization in the computational linguistics (CL) domain. This year, the dataset comprised 60 annotated sets of citing and reference papers from the open access research papers in the CL domain. The Shared Task was organized as a part of the 41st Annual Conference of the Special Interest Group in Information Retrieval (SIGIR), held in Ann Arbor, USA in July 2018. We compare the participating systems in terms of two evaluation metrics. The annotated dataset and evaluation scripts can be accessed and used by the community from: \url{https://github.com/WING-NUS/scisumm-corpus}.
The CL-SciSumm Shared Task is the first medium-scale shared task on scientific document summarization in the computational linguistics~(CL) domain. In 2019, it comprised three tasks: (1A) identifying relationships between citing documents and the referred document, (1B) classifying the discourse facets, and (2) generating the abstractive summary. The dataset comprised 40 annotated sets of citing and reference papers of the CL-SciSumm 2018 corpus and 1000 more from the SciSummNet dataset. All papers are from the open access research papers in the CL domain. This overview describes the participation and the official results of the CL-SciSumm 2019 Shared Task, organized as a part of the 42nd Annual Conference of the Special Interest Group in Information Retrieval (SIGIR), held in Paris, France in July 2019. We compare the participating systems in terms of two evaluation metrics and discuss the use of ROUGE as an evaluation metric. The annotated dataset used for this shared task and the scripts used for evaluation can be accessed and used by the community at: https://github.com/WING-NUS/scisumm-corpus.
Machine learning plays an increasing role in intelligent tutoring systems as both the amount of data available and specialization among students grow. Nowadays, these systems are frequently deployed on mobile applications. Users on such mobile education platforms are dynamic, frequently being added, accessing the application with varying levels of focus, and changing while using the service. The education material itself, on the other hand, is often static and is an exhaustible resource whose use in tasks such as problem recommendation must be optimized. The ability to update user models with respect to educational material in real-time is thus essential; however, existing approaches require time-consuming re-training of user features whenever new data is added. In this paper, we introduce a neural pedagogical agent for real-time user modeling in the task of predicting user response correctness, a central task for mobile education applications. Our model, inspired by work in natural language processing on sequence modeling and machine translation, updates user features in real-time via bidirectional recurrent neural networks with an attention mechanism over embedded question-response pairs. We experiment on the mobile education application SantaTOEIC, which has 559k users, 66M response data points as well as a set of 10k study problems each expert-annotated with topic tags and gathered since 2016. Our model outperforms existing approaches over several metrics in predicting user response correctness, notably out-performing other methods on new users without large question-response histories. Additionally, our attention mechanism and annotated tag set allow us to create an interpretable education platform, with a smart review system that addresses the aforementioned issue of varied user attention and problem exhaustion.
In this paper, we propose to boost low-resource cross-lingual document retrieval performance with deep bilingual query-document representations. We match queries and documents in both source and target languages with four components, each of which is implemented as a term interaction-based deep neural network with cross-lingual word embeddings as input. By including query likelihood scores as extra features, our model effectively learns to rerank the retrieved documents by using a small number of relevance labels for low-resource language pairs. Due to the shared cross-lingual word embedding space, the model can also be directly applied to another language pair without any training label. Experimental results on the MATERIAL dataset show that our model outperforms the competitive translation-based baselines on English-Swahili, English-Tagalog, and English-Somali cross-lingual information retrieval tasks.
We present SParC, a dataset for cross-domainSemanticParsing inContext that consists of 4,298 coherent question sequences (12k+ individual questions annotated with SQL queries). It is obtained from controlled user interactions with 200 complex databases over 138 domains. We provide an in-depth analysis of SParC and show that it introduces new challenges compared to existing datasets. SParC demonstrates complex contextual dependencies, (2) has greater semantic diversity, and (3) requires generalization to unseen domains due to its cross-domain nature and the unseen databases at test time. We experiment with two state-of-the-art text-to-SQL models adapted to the context-dependent, cross-domain setup. The best model obtains an exact match accuracy of 20.2% over all questions and less than10% over all interaction sequences, indicating that the cross-domain setting and the con-textual phenomena of the dataset present significant challenges for future research. The dataset, baselines, and leaderboard are released at https://yale-lily.github.io/sparc.
We introduce a new syntax-aware model for dependency-based semantic role labeling that outperforms syntax-agnostic models for English and Spanish. We use a BiLSTM to tag the text with supertags extracted from dependency parses, and we feed these supertags, along with words and parts of speech, into a deep highway BiLSTM for semantic role labeling. Our model combines the strengths of earlier models that performed SRL on the basis of a full dependency parse with more recent models that use no syntactic information at all. Our local and non-ensemble model achieves state-of-the-art performance on the CoNLL 09 English and Spanish datasets. SRL models benefit from syntactic information, and we show that supertagging is a simple, powerful, and robust way to incorporate syntax into a neural SRL system.