From Classical to Topological Neural Networks Under Uncertainty

This chapter explores neural networks, topological data analysis, and topological deep learning techniques, alongside statistical Bayesian methods, for processing images, time series, and graphs to maximize the potential of artificial intelligence in the military domain. Throughout the chapter, we highlight practical applications spanning image, video, audio, and time-series recognition, fraud detection, and link prediction for graphical data, illustrating how topology-aware and uncertainty-aware models can enhance robustness, interpretability, and generalization.

Linked Data Classification using Neurochaos Learning

Neurochaos Learning (NL) has shown promise in recent times over traditional deep learning due to its two key features: ability to learn from small sized training samples, and low compute requirements. In prior work, NL has been implemented and extensively tested on separable and time series data, and demonstrated its superior performance on both classification and regression tasks. In this paper, we investigate the next step in NL, viz., applying NL to linked data, in particular, data that is represented in the form of knowledge graphs. We integrate linked data into NL by implementing node aggregation on knowledge graphs, and then feeding the aggregated node features to the simplest NL architecture: ChaosNet. We demonstrate the results of our implementation on homophilic graph datasets as well as heterophilic graph datasets of verying heterophily. We show better efficacy of our approach on homophilic graphs than on heterophilic graphs. While doing so, we also present our analysis of the results, as well as suggestions for future work.

Low Rank Transformer for Multivariate Time Series Anomaly Detection and Localization

Multivariate time series (MTS) anomaly diagnosis, which encompasses both anomaly detection and localization, is critical for the safety and reliability of complex, large-scale real-world systems. The vast majority of existing anomaly diagnosis methods offer limited theoretical insights, especially for anomaly localization, which is a vital but largely unexplored area. The aim of this contribution is to study the learning process of a Transformer when applied to MTS by revealing connections to statistical time series methods. Based on these theoretical insights, we propose the Attention Low-Rank Transformer (ALoRa-T) model, which applies low-rank regularization to self-attention, and we introduce the Attention Low-Rank score, effectively capturing the temporal characteristics of anomalies. Finally, to enable anomaly localization, we propose the ALoRa-Loc method, a novel approach that associates anomalies to specific variables by quantifying interrelationships among time series. Extensive experiments and real data analysis, show that the proposed methodology significantly outperforms state-of-the-art methods in both detection and localization tasks.

Power Interpretable Causal ODE Networks: A Unified Model for Explainable Anomaly Detection and Root Cause Analysis in Power Systems

Anomaly detection and root cause analysis (RCA) are critical for ensuring the safety and resilience of cyber-physical systems such as power grids. However, existing machine learning models for time series anomaly detection often operate as black boxes, offering only binary outputs without any explanation, such as identifying anomaly type and origin. To address this challenge, we propose Power Interpretable Causality Ordinary Differential Equation (PICODE) Networks, a unified, causality-informed architecture that jointly performs anomaly detection along with the explanation why it is detected as an anomaly, including root cause localization, anomaly type classification, and anomaly shape characterization. Experimental results in power systems demonstrate that PICODE achieves competitive detection performance while offering improved interpretability and reduced reliance on labeled data or external causal graphs. We provide theoretical results demonstrating the alignment between the shape of anomaly functions and the changes in the weights of the extracted causal graphs.

It's TIME: Towards the Next Generation of Time Series Forecasting Benchmarks

Time series foundation models (TSFMs) are revolutionizing the forecasting landscape from specific dataset modeling to generalizable task evaluation. However, we contend that existing benchmarks exhibit common limitations in four dimensions: constrained data composition dominated by reused legacy sources, compromised data integrity lacking rigorous quality assurance, misaligned task formulations detached from real-world contexts, and rigid analysis perspectives that obscure generalizable insights. To bridge these gaps, we introduce TIME, a next-generation task-centric benchmark comprising 50 fresh datasets and 98 forecasting tasks, tailored for strict zero-shot TSFM evaluation free from data leakage. Integrating large language models and human expertise, we establish a rigorous human-in-the-loop benchmark construction pipeline to ensure high data integrity and redefine task formulation by aligning forecasting configurations with real-world operational requirements and variate predictability. Furthermore, we propose a novel pattern-level evaluation perspective that moves beyond traditional dataset-level evaluations based on static meta labels. By leveraging structural time series features to characterize intrinsic temporal properties, this approach offers generalizable insights into model capabilities across diverse patterns. We evaluate 12 representative TSFMs and establish a multi-granular leaderboard to facilitate in-depth analysis and visualized inspection. The leaderboard is available at https://huggingface.co/spaces/Real-TSF/TIME-leaderboard.

Benchmarking IoT Time-Series AD with Event-Level Augmentations

Anomaly detection (AD) for safety-critical IoT time series should be judged at the event level: reliability and earliness under realistic perturbations. Yet many studies still emphasize point-level results on curated base datasets, limiting value for model selection in practice. We introduce an evaluation protocol with unified event-level augmentations that simulate real-world issues: calibrated sensor dropout, linear and log drift, additive noise, and window shifts. We also perform sensor-level probing via mask-as-missing zeroing with per-channel influence estimation to support root-cause analysis. We evaluate 14 representative models on five public anomaly datasets (SWaT, WADI, SMD, SKAB, TEP) and two industrial datasets (steam turbine, nuclear turbogenerator) using unified splits and event aggregation. There is no universal winner: graph-structured models transfer best under dropout and long events (e.g., on SWaT under additive noise F1 drops 0.804->0.677 for a graph autoencoder, 0.759->0.680 for a graph-attention variant, and 0.762->0.756 for a hybrid graph attention model); density/flow models work well on clean stationary plants but can be fragile to monotone drift; spectral CNNs lead when periodicity is strong; reconstruction autoencoders become competitive after basic sensor vetting; predictive/hybrid dynamics help when faults break temporal dependencies but remain window-sensitive. The protocol also informs design choices: on SWaT under log drift, replacing normalizing flows with Gaussian density reduces high-stress F1 from ~0.75 to ~0.57, and fixing a learned DAG gives a small clean-set gain (~0.5-1.0 points) but increases drift sensitivity by ~8x.

Policy4OOD: A Knowledge-Guided World Model for Policy Intervention Simulation against the Opioid Overdose Crisis

The opioid epidemic remains one of the most severe public health crises in the United States, yet evaluating policy interventions before implementation is difficult: multiple policies interact within a dynamic system where targeting one risk pathway may inadvertently amplify another. We argue that effective opioid policy evaluation requires three capabilities -- forecasting future outcomes under current policies, counterfactual reasoning about alternative past decisions, and optimization over candidate interventions -- and propose to unify them through world modeling. We introduce Policy4OOD, a knowledge-guided spatio-temporal world model that addresses three core challenges: what policies prescribe, where effects manifest, and when effects unfold.Policy4OOD jointly encodes policy knowledge graphs, state-level spatial dependencies, and socioeconomic time series into a policy-conditioned Transformer that forecasts future opioid outcomes.Once trained, the world model serves as a simulator: forecasting requires only a forward pass, counterfactual analysis substitutes alternative policy encodings in the historical sequence, and policy optimization employs Monte Carlo Tree Search over the learned simulator. To support this framework, we construct a state-level monthly dataset (2019--2024) integrating opioid mortality, socioeconomic indicators, and structured policy encodings. Experiments demonstrate that spatial dependencies and structured policy knowledge significantly improve forecasting accuracy, validating each architectural component and the potential of world modeling for data-driven public health decision support.

WaveFormer: Wavelet Embedding Transformer for Biomedical Signals

Biomedical signal classification presents unique challenges due to long sequences, complex temporal dynamics, and multi-scale frequency patterns that are poorly captured by standard transformer architectures. We propose WaveFormer, a transformer architecture that integrates wavelet decomposition at two critical stages: embedding construction, where multi-channel Discrete Wavelet Transform (DWT) extracts frequency features to create tokens containing both time-domain and frequency-domain information, and positional encoding, where Dynamic Wavelet Positional Encoding (DyWPE) adapts position embeddings to signal-specific temporal structure through mono-channel DWT analysis. We evaluate WaveFormer on eight diverse datasets spanning human activity recognition and brain signal analysis, with sequence lengths ranging from 50 to 3000 timesteps and channel counts from 1 to 144. Experimental results demonstrate that WaveFormer achieves competitive performance through comprehensive frequency-aware processing. Our approach provides a principled framework for incorporating frequency-domain knowledge into transformer-based time series classification.

EEO-TFV: Escape-Explore Optimizer for Web-Scale Time-Series Forecasting and Vision Analysis

Transformer-based foundation models have achieved remarkable progress in tasks such as time-series forecasting and image segmentation. However, they frequently suffer from error accumulation in multivariate long-sequence prediction and exhibit vulnerability to out-of-distribution samples in image-related tasks. Furthermore, these challenges become particularly pronounced in large-scale Web data analysis tasks, which typically involve complex temporal patterns and multimodal features. This complexity substantially increases optimization difficulty, rendering models prone to stagnation at saddle points within high-dimensional parameter spaces. To address these issues, we propose a lightweight Transformer architecture in conjunction with a novel Escape-Explore Optimizer (EEO). The optimizer enhances both exploration and generalization while effectively avoiding sharp minima and saddle-point traps. Experimental results show that, in representative Web data scenarios, our method achieves performance on par with state-of-the-art models across 11 time-series benchmark datasets and the Synapse medical image segmentation task. Moreover, it demonstrates superior generalization and stability, thereby validating its potential as a versatile cross-task foundation model for Web-scale data mining and analysis.

AIRS-Bench: a Suite of Tasks for Frontier AI Research Science Agents

LLM agents hold significant promise for advancing scientific research. To accelerate this progress, we introduce AIRS-Bench (the AI Research Science Benchmark), a suite of 20 tasks sourced from state-of-the-art machine learning papers. These tasks span diverse domains, including language modeling, mathematics, bioinformatics, and time series forecasting. AIRS-Bench tasks assess agentic capabilities over the full research lifecycle -- including idea generation, experiment analysis and iterative refinement -- without providing baseline code. The AIRS-Bench task format is versatile, enabling easy integration of new tasks and rigorous comparison across different agentic frameworks. We establish baselines using frontier models paired with both sequential and parallel scaffolds. Our results show that agents exceed human SOTA in four tasks but fail to match it in sixteen others. Even when agents surpass human benchmarks, they do not reach the theoretical performance ceiling for the underlying tasks. These findings indicate that AIRS-Bench is far from saturated and offers substantial room for improvement. We open-source the AIRS-Bench task definitions and evaluation code to catalyze further development in autonomous scientific research.