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Stain-Robust Mitotic Figure Detection for the Mitosis Domain Generalization Challenge


Sep 02, 2021
Mostafa Jahanifar, Adam Shephard, Neda Zamani Tajeddin, R. M. Saad Bashir, Mohsin Bilal, Syed Ali Khurram, Fayyaz Minhas, Nasir Rajpoot


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Robust Interactive Semantic Segmentation of Pathology Images with Minimal User Input


Aug 30, 2021
Mostafa Jahanifar, Neda Zamani Tajeddin, Navid Alemi Koohbanani, Nasir Rajpoot


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Lizard: A Large-Scale Dataset for Colonic Nuclear Instance Segmentation and Classification


Aug 25, 2021
Simon Graham, Mostafa Jahanifar, Ayesha Azam, Mohammed Nimir, Yee-Wah Tsang, Katherine Dodd, Emily Hero, Harvir Sahota, Atisha Tank, Ksenija Benes, Noorul Wahab, Fayyaz Minhas, Shan E Ahmed Raza, Hesham El Daly, Kishore Gopalakrishnan, David Snead, Nasir Rajpoot


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A QuadTree Image Representation for Computational Pathology


Aug 24, 2021
Rob Jewsbury, Abhir Bhalerao, Nasir Rajpoot

* 11 pages, 5 figures, accepted to CDPath ICCV 2021 

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Cells are Actors: Social Network Analysis with Classical ML for SOTA Histology Image Classification


Jul 10, 2021
Neda Zamanitajeddin, Mostafa Jahanifar, Nasir Rajpoot


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Semantic annotation for computational pathology: Multidisciplinary experience and best practice recommendations


Jun 25, 2021
Noorul Wahab, Islam M Miligy, Katherine Dodd, Harvir Sahota, Michael Toss, Wenqi Lu, Mostafa Jahanifar, Mohsin Bilal, Simon Graham, Young Park, Giorgos Hadjigeorghiou, Abhir Bhalerao, Ayat Lashen, Asmaa Ibrahim, Ayaka Katayama, Henry O Ebili, Matthew Parkin, Tom Sorell, Shan E Ahmed Raza, Emily Hero, Hesham Eldaly, Yee Wah Tsang, Kishore Gopalakrishnan, David Snead, Emad Rakha, Nasir Rajpoot, Fayyaz Minhas


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Now You See It, Now You Dont: Adversarial Vulnerabilities in Computational Pathology


Jun 16, 2021
Alex Foote, Amina Asif, Ayesha Azam, Tim Marshall-Cox, Nasir Rajpoot, Fayyaz Minhas

* 10 pages 

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A digital score of tumour-associated stroma infiltrating lymphocytes predicts survival in head and neck squamous cell carcinoma


Apr 16, 2021
Muhammad Shaban, Shan E Ahmed Raza, Mariam Hassan, Arif Jamshed, Sajid Mushtaq, Asif Loya, Nikolaos Batis, Jill Brooks, Paul Nankivell, Neil Sharma, Max Robinson, Hisham Mehanna, Syed Ali Khurram, Nasir Rajpoot


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Deep Multi-Resolution Dictionary Learning for Histopathology Image Analysis


Apr 01, 2021
Nima Hatami, Mohsin Bilal, Nasir Rajpoot


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Multiple Instance Captioning: Learning Representations from Histopathology Textbooks and Articles


Mar 08, 2021
Jevgenij Gamper, Nasir Rajpoot

* Accepted at CVPR 2021 

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Classification of COVID-19 via Homology of CT-SCAN


Feb 21, 2021
Sohail Iqbal, H. Fareed Ahmed, Talha Qaiser, Muhammad Imran Qureshi, Nasir Rajpoot


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Self-Path: Self-supervision for Classification of Pathology Images with Limited Annotations


Aug 12, 2020
Navid Alemi Koohbanani, Balagopal Unnikrishnan, Syed Ali Khurram, Pavitra Krishnaswamy, Nasir Rajpoot


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SAFRON: Stitching Across the Frontier for Generating Colorectal Cancer Histology Images


Aug 11, 2020
Srijay Deshpande, Fayyaz Minhas, Simon Graham, Nasir Rajpoot


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NuClick: A Deep Learning Framework for Interactive Segmentation of Microscopy Images


May 29, 2020
Navid Alemi Koohbanani, Mostafa Jahanifar, Neda Zamani Tajadin, Nasir Rajpoot


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Multi-Task Learning in Histo-pathology for Widely Generalizable Model


May 09, 2020
Jevgenij Gamper, Navid Alemi Kooohbanani, Nasir Rajpoot

* AI4CC ICLR 2020 workshop 

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PanNuke Dataset Extension, Insights and Baselines


Apr 22, 2020
Jevgenij Gamper, Navid Alemi Koohbanani, Ksenija Benes, Simon Graham, Mostafa Jahanifar, Syed Ali Khurram, Ayesha Azam, Katherine Hewitt, Nasir Rajpoot

* Work in progress 

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Dense Steerable Filter CNNs for Exploiting Rotational Symmetry in Histology Images


Apr 06, 2020
Simon Graham, David Epstein, Nasir Rajpoot


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Meta-SVDD: Probabilistic Meta-Learning for One-Class Classification in Cancer Histology Images


Mar 06, 2020
Jevgenij Gamper, Brandon Chan, Yee Wah Tsang, David Snead, Nasir Rajpoot

* Accepted to Medical Imaging meets NeurIPS Workshop, Conference on Neural Information Processing Systems 2019, Vancouver 

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NuClick: From Clicks in the Nuclei to Nuclear Boundaries


Sep 07, 2019
Mostafa Jahanifar, Navid Alemi Koohbanani, Nasir Rajpoot


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CGC-Net: Cell Graph Convolutional Network for Grading of Colorectal Cancer Histology Images


Sep 03, 2019
Yanning Zhou, Simon Graham, Navid Alemi Koohbanani, Muhammad Shaban, Pheng-Ann Heng, Nasir Rajpoot

* Accepted in ICCVW 2019 (Visual Recognition for Medical Images) 

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Nuclear Instance Segmentation using a Proposal-Free Spatially Aware Deep Learning Framework


Aug 27, 2019
Navid Alemi Koohbanani, Mostafa Jahanifar, Ali Gooya, Nasir Rajpoot


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XY Network for Nuclear Segmentation in Multi-Tissue Histology Images


Dec 16, 2018
Simon Graham, Quoc Dang Vu, Shan E Ahmed Raza, Jin Tae Kwak, Nasir Rajpoot


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Methods for Segmentation and Classification of Digital Microscopy Tissue Images


Oct 31, 2018
Quoc Dang Vu, Simon Graham, Minh Nguyen Nhat To, Muhammad Shaban, Talha Qaiser, Navid Alemi Koohbanani, Syed Ali Khurram, Tahsin Kurc, Keyvan Farahani, Tianhao Zhao, Rajarsi Gupta, Jin Tae Kwak, Nasir Rajpoot, Joel Saltz


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Leveraging Transfer Learning for Segmenting Lesions and their Attributes in Dermoscopy Images


Sep 23, 2018
Navid Alemi Koohbanani, Mostafa Jahanifar, Neda Zamani Tajeddin, Ali Gooya, Nasir Rajpoot


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