Explaining the Power of Topological Data Analysis in Graph Machine Learning

Topological Data Analysis (TDA) has been praised by researchers for its ability to capture intricate shapes and structures within data. TDA is considered robust in handling noisy and high-dimensional datasets, and its interpretability is believed to promote an intuitive understanding of model behavior. However, claims regarding the power and usefulness of TDA have only been partially tested in application domains where TDA-based models are compared to other graph machine learning approaches, such as graph neural networks. We meticulously test claims on TDA through a comprehensive set of experiments and validate their merits. Our results affirm TDA's robustness against outliers and its interpretability, aligning with proponents' arguments. However, we find that TDA does not significantly enhance the predictive power of existing methods in our specific experiments, while incurring significant computational costs. We investigate phenomena related to graph characteristics, such as small diameters and high clustering coefficients, to mitigate the computational expenses of TDA computations. Our results offer valuable perspectives on integrating TDA into graph machine learning tasks.

Core-based Trend Detection in Blockchain Networks

Blockchains are now significantly easing trade finance, with billions of dollars worth of assets being transacted daily. However, analyzing these networks remains challenging due to the large size and complexity of the data. We introduce a scalable approach called "InnerCore" for identifying key actors in blockchain-based networks and providing a sentiment indicator for the networks using data depth-based core decomposition and centered-motif discovery. InnerCore is a computationally efficient, unsupervised approach suitable for analyzing large temporal graphs. We demonstrate its effectiveness through case studies on the recent collapse of LunaTerra and the Proof-of-Stake (PoS) switch of Ethereum, using external ground truth collected by a leading blockchain analysis company. Our experiments show that InnerCore can match the qualified analysis accurately without human involvement, automating blockchain analysis and its trend detection in a scalable manner.

Reduction Algorithms for Persistence Diagrams of Networks: CoralTDA and PrunIT

Topological data analysis (TDA) delivers invaluable and complementary information on the intrinsic properties of data inaccessible to conventional methods. However, high computational costs remain the primary roadblock hindering the successful application of TDA in real-world studies, particularly with machine learning on large complex networks. Indeed, most modern networks such as citation, blockchain, and online social networks often have hundreds of thousands of vertices, making the application of existing TDA methods infeasible. We develop two new, remarkably simple but effective algorithms to compute the exact persistence diagrams of large graphs to address this major TDA limitation. First, we prove that $(k+1)$-core of a graph $\mathcal{G}$ suffices to compute its $k^{th}$ persistence diagram, $PD_k(\mathcal{G})$. Second, we introduce a pruning algorithm for graphs to compute their persistence diagrams by removing the dominated vertices. Our experiments on large networks show that our novel approach can achieve computational gains up to 95%. The developed framework provides the first bridge between the graph theory and TDA, with applications in machine learning of large complex networks. Our implementation is available at https://github.com/cakcora/PersistentHomologyWithCoralPrunit

ChainNet: Learning on Blockchain Graphs with Topological Features

With emergence of blockchain technologies and the associated cryptocurrencies, such as Bitcoin, understanding network dynamics behind Blockchain graphs has become a rapidly evolving research direction. Unlike other financial networks, such as stock and currency trading, blockchain based cryptocurrencies have the entire transaction graph accessible to the public (i.e., all transactions can be downloaded and analyzed). A natural question is then to ask whether the dynamics of the transaction graph impacts the price of the underlying cryptocurrency. We show that standard graph features such as degree distribution of the transaction graph may not be sufficient to capture network dynamics and its potential impact on fluctuations of Bitcoin price. In contrast, the new graph associated topological features computed using the tools of persistent homology, are found to exhibit a high utility for predicting Bitcoin price dynamics. %explain higher order interactions among the nodes in Blockchain graphs and can be used to build much more accurate price prediction models. Using the proposed persistent homology-based techniques, we offer a new elegant, easily extendable and computationally light approach for graph representation learning on Blockchain.