Deep Learning Approach for Early Stage Lung Cancer Detection

Lung cancer is the leading cause of death among different types of cancers. Every year, the lives lost due to lung cancer exceed those lost to pancreatic, breast, and prostate cancer combined. The survival rate for lung cancer patients is very low compared to other cancer patients due to late diagnostics. Thus, early lung cancer diagnostics is crucial for patients to receive early treatments, increasing the survival rate or even becoming cancer-free. This paper proposed a deep-learning model for early lung cancer prediction and diagnosis from Computed Tomography (CT) scans. The proposed mode achieves high accuracy. In addition, it can be a beneficial tool to support radiologists' decisions in predicting and detecting lung cancer and its stage.

Interpreting and Correcting Medical Image Classification with PIP-Net

Part-prototype models are explainable-by-design image classifiers, and a promising alternative to black box AI. This paper explores the applicability and potential of interpretable machine learning, in particular PIP-Net, for automated diagnosis support on real-world medical imaging data. PIP-Net learns human-understandable prototypical image parts and we evaluate its accuracy and interpretability for fracture detection and skin cancer diagnosis. We find that PIP-Net's decision making process is in line with medical classification standards, while only provided with image-level class labels. Because of PIP-Net's unsupervised pretraining of prototypes, data quality problems such as undesired text in an X-ray or labelling errors can be easily identified. Additionally, we are the first to show that humans can manually correct the reasoning of PIP-Net by directly disabling undesired prototypes. We conclude that part-prototype models are promising for medical applications due to their interpretability and potential for advanced model debugging.

A Voting-Stacking Ensemble of Inception Networks for Cervical Cytology Classification

Cervical cancer is one of the most severe diseases threatening women's health. Early detection and diagnosis can significantly reduce cancer risk, in which cervical cytology classification is indispensable. Researchers have recently designed many networks for automated cervical cancer diagnosis, but the limited accuracy and bulky size of these individual models cannot meet practical application needs. To address this issue, we propose a Voting-Stacking ensemble strategy, which employs three Inception networks as base learners and integrates their outputs through a voting ensemble. The samples misclassified by the ensemble model generate a new training set on which a linear classification model is trained as the meta-learner and performs the final predictions. In addition, a multi-level Stacking ensemble framework is designed to improve performance further. The method is evaluated on the SIPakMed, Herlev, and Mendeley datasets, achieving accuracies of 100\%, 100\%, and 100\%, respectively. The experimental results outperform the current state-of-the-art (SOTA) methods, demonstrating its potential for reducing screening workload and helping pathologists detect cervical cancer. The source code of the work is available at \underline{https://github.com/qianlinyi/Voting-Stacking-Ensemble}.

Self-Supervised Deep Learning to Enhance Breast Cancer Detection on Screening Mammography

A major limitation in applying deep learning to artificial intelligence (AI) systems is the scarcity of high-quality curated datasets. We investigate strong augmentation based self-supervised learning (SSL) techniques to address this problem. Using breast cancer detection as an example, we first identify a mammogram-specific transformation paradigm and then systematically compare four recent SSL methods representing a diversity of approaches. We develop a method to convert a pretrained model from making predictions on uniformly tiled patches to whole images, and an attention-based pooling method that improves the classification performance. We found that the best SSL model substantially outperformed the baseline supervised model. The best SSL model also improved the data efficiency of sample labeling by nearly 4-fold and was highly transferrable from one dataset to another. SSL represents a major breakthrough in computer vision and may help the AI for medical imaging field to shift away from supervised learning and dependency on scarce labels.

MammoDG: Generalisable Deep Learning Breaks the Limits of Cross-Domain Multi-Center Breast Cancer Screening

Breast cancer is a major cause of cancer death among women, emphasising the importance of early detection for improved treatment outcomes and quality of life. Mammography, the primary diagnostic imaging test, poses challenges due to the high variability and patterns in mammograms. Double reading of mammograms is recommended in many screening programs to improve diagnostic accuracy but increases radiologists' workload. Researchers explore Machine Learning models to support expert decision-making. Stand-alone models have shown comparable or superior performance to radiologists, but some studies note decreased sensitivity with multiple datasets, indicating the need for high generalisation and robustness models. This work devises MammoDG, a novel deep-learning framework for generalisable and reliable analysis of cross-domain multi-center mammography data. MammoDG leverages multi-view mammograms and a novel contrastive mechanism to enhance generalisation capabilities. Extensive validation demonstrates MammoDG's superiority, highlighting the critical importance of domain generalisation for trustworthy mammography analysis in imaging protocol variations.

WWFedCBMIR: World-Wide Federated Content-Based Medical Image Retrieval

The paper proposes a Federated Content-Based Medical Image Retrieval (FedCBMIR) platform that utilizes Federated Learning (FL) to address the challenges of acquiring a diverse medical data set for training CBMIR models. CBMIR assists pathologists in diagnosing breast cancer more rapidly by identifying similar medical images and relevant patches in prior cases compared to traditional cancer detection methods. However, CBMIR in histopathology necessitates a pool of Whole Slide Images (WSIs) to train to extract an optimal embedding vector that leverages search engine performance, which may not be available in all centers. The strict regulations surrounding data sharing in medical data sets also hinder research and model development, making it difficult to collect a rich data set. The proposed FedCBMIR distributes the model to collaborative centers for training without sharing the data set, resulting in shorter training times than local training. FedCBMIR was evaluated in two experiments with three scenarios on BreaKHis and Camelyon17 (CAM17). The study shows that the FedCBMIR method increases the F1-Score (F1S) of each client to 98%, 96%, 94%, and 97% in the BreaKHis experiment with a generalized model of four magnifications and does so in 6.30 hours less time than total local training. FedCBMIR also achieves 98% accuracy with CAM17 in 2.49 hours less training time than local training, demonstrating that our FedCBMIR is both fast and accurate for both pathologists and engineers. In addition, our FedCBMIR provides similar images with higher magnification for non-developed countries where participate in the worldwide FedCBMIR with developed countries to facilitate mitosis measuring in breast cancer diagnosis. We evaluate this scenario by scattering BreaKHis into four centers with different magnifications.

Detecting Throat Cancer from Speech Signals Using Machine Learning: A Reproducible Literature Review

In this work we perform a scoping review of the current literature on the detection of throat cancer from speech recordings using machine learning and artificial intelligence. We find 22 papers within this area and discuss their methods and results. We split these papers into two groups - nine performing binary classification, and 13 performing multi-class classification. The papers present a range of methods with neural networks being most commonly implemented. Many features are also extracted from the audio before classification, with the most common bring mel-frequency cepstral coefficients. None of the papers found in this search have associated code repositories and as such are not reproducible. Therefore, we create a publicly available code repository of our own classifiers. We use transfer learning on a multi-class problem, classifying three pathologies and healthy controls. Using this technique we achieve an unweighted average recall of 53.54%, sensitivity of 83.14%, and specificity of 64.00%. We compare our classifiers with the results obtained on the same dataset and find similar results.

Structured State Space Models for Multiple Instance Learning in Digital Pathology

Multiple instance learning is an ideal mode of analysis for histopathology data, where vast whole slide images are typically annotated with a single global label. In such cases, a whole slide image is modelled as a collection of tissue patches to be aggregated and classified. Common models for performing this classification include recurrent neural networks and transformers. Although powerful compression algorithms, such as deep pre-trained neural networks, are used to reduce the dimensionality of each patch, the sequences arising from whole slide images remain excessively long, routinely containing tens of thousands of patches. Structured state space models are an emerging alternative for sequence modelling, specifically designed for the efficient modelling of long sequences. These models invoke an optimal projection of an input sequence into memory units that compress the entire sequence. In this paper, we propose the use of state space models as a multiple instance learner to a variety of problems in digital pathology. Across experiments in metastasis detection, cancer subtyping, mutation classification, and multitask learning, we demonstrate the competitiveness of this new class of models with existing state of the art approaches. Our code is available at https://github.com/MICS-Lab/s4_digital_pathology.

Use of Transfer Learning and Wavelet Transform for Breast Cancer Detection

Breast cancer is one of the most common cause of deaths among women. Mammography is a widely used imaging modality that can be used for cancer detection in its early stages. Deep learning is widely used for the detection of cancerous masses in the images obtained via mammography. The need to improve accuracy remains constant due to the sensitive nature of the datasets so we introduce segmentation and wavelet transform to enhance the important features in the image scans. Our proposed system aids the radiologist in the screening phase of cancer detection by using a combination of segmentation and wavelet transforms as pre-processing augmentation that leads to transfer learning in neural networks. The proposed system with these pre-processing techniques significantly increases the accuracy of detection on Mini-MIAS.

Machine Learning-based Lung and Colon Cancer Detection using Deep Feature Extraction and Ensemble Learning

Cancer is a fatal disease caused by a combination of genetic diseases and a variety of biochemical abnormalities. Lung and colon cancer have emerged as two of the leading causes of death and disability in humans. The histopathological detection of such malignancies is usually the most important component in determining the best course of action. Early detection of the ailment on either front considerably decreases the likelihood of mortality. Machine learning and deep learning techniques can be utilized to speed up such cancer detection, allowing researchers to study a large number of patients in a much shorter amount of time and at a lower cost. In this research work, we introduced a hybrid ensemble feature extraction model to efficiently identify lung and colon cancer. It integrates deep feature extraction and ensemble learning with high-performance filtering for cancer image datasets. The model is evaluated on histopathological (LC25000) lung and colon datasets. According to the study findings, our hybrid model can detect lung, colon, and (lung and colon) cancer with accuracy rates of 99.05%, 100%, and 99.30%, respectively. The study's findings show that our proposed strategy outperforms existing models significantly. Thus, these models could be applicable in clinics to support the doctor in the diagnosis of cancers.