RepoMaster: Autonomous Exploration and Understanding of GitHub Repositories for Complex Task Solving

The ultimate goal of code agents is to solve complex tasks autonomously. Although large language models (LLMs) have made substantial progress in code generation, real-world tasks typically demand full-fledged code repositories rather than simple scripts. Building such repositories from scratch remains a major challenge. Fortunately, GitHub hosts a vast, evolving collection of open-source repositories, which developers frequently reuse as modular components for complex tasks. Yet, existing frameworks like OpenHands and SWE-Agent still struggle to effectively leverage these valuable resources. Relying solely on README files provides insufficient guidance, and deeper exploration reveals two core obstacles: overwhelming information and tangled dependencies of repositories, both constrained by the limited context windows of current LLMs. To tackle these issues, we propose RepoMaster, an autonomous agent framework designed to explore and reuse GitHub repositories for solving complex tasks. For efficient understanding, RepoMaster constructs function-call graphs, module-dependency graphs, and hierarchical code trees to identify essential components, providing only identified core elements to the LLMs rather than the entire repository. During autonomous execution, it progressively explores related components using our exploration tools and prunes information to optimize context usage. Evaluated on the adjusted MLE-bench, RepoMaster achieves a 110% relative boost in valid submissions over the strongest baseline OpenHands. On our newly released GitTaskBench, RepoMaster lifts the task-pass rate from 24.1% to 62.9% while reducing token usage by 95%. Our code and demonstration materials are publicly available at https://github.com/wanghuacan/RepoMaster.

Secure Traffic Sign Recognition: An Attention-Enabled Universal Image Inpainting Mechanism against Light Patch Attacks

Traffic sign recognition systems play a crucial role in assisting drivers to make informed decisions while driving. However, due to the heavy reliance on deep learning technologies, particularly for future connected and autonomous driving, these systems are susceptible to adversarial attacks that pose significant safety risks to both personal and public transportation. Notably, researchers recently identified a new attack vector to deceive sign recognition systems: projecting well-designed adversarial light patches onto traffic signs. In comparison with traditional adversarial stickers or graffiti, these emerging light patches exhibit heightened aggression due to their ease of implementation and outstanding stealthiness. To effectively counter this security threat, we propose a universal image inpainting mechanism, namely, SafeSign. It relies on attention-enabled multi-view image fusion to repair traffic signs contaminated by adversarial light patches, thereby ensuring the accurate sign recognition. Here, we initially explore the fundamental impact of malicious light patches on the local and global feature spaces of authentic traffic signs. Then, we design a binary mask-based U-Net image generation pipeline outputting diverse contaminated sign patterns, to provide our image inpainting model with needed training data. Following this, we develop an attention mechanism-enabled neural network to jointly utilize the complementary information from multi-view images to repair contaminated signs. Finally, extensive experiments are conducted to evaluate SafeSign's effectiveness in resisting potential light patch-based attacks, bringing an average accuracy improvement of 54.8% in three widely-used sign recognition models

Personalised Drug Identifier for Cancer Treatment with Transformers using Auxiliary Information

Cancer remains a global challenge due to its growing clinical and economic burden. Its uniquely personal manifestation, which makes treatment difficult, has fuelled the quest for personalized treatment strategies. Thus, genomic profiling is increasingly becoming part of clinical diagnostic panels. Effective use of such panels requires accurate drug response prediction (DRP) models, which are challenging to build due to limited labelled patient data. Previous methods to address this problem have used various forms of transfer learning. However, they do not explicitly model the variable length sequential structure of the list of mutations in such diagnostic panels. Further, they do not utilize auxiliary information (like patient survival) for model training. We address these limitations through a novel transformer based method, which surpasses the performance of state-of-the-art DRP models on benchmark data. We also present the design of a treatment recommendation system (TRS), which is currently deployed at the National University Hospital, Singapore and is being evaluated in a clinical trial.