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Wiro J. Niessen
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for the Alzheimers Disease Neuroimaging Initiative

Computer-aided diagnosis and prediction in brain disorders


Jun 29, 2022
Vikram Venkatraghavan, Sebastian R. van der Voort, Daniel Bos, Marion Smits, Frederik Barkhof, Wiro J. Niessen, Stefan Klein, Esther E. Bron

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Reproducible radiomics through automated machine learning validated on twelve clinical applications


Aug 19, 2021
Martijn P. A. Starmans, Sebastian R. van der Voort, Thomas Phil, Milea J. M. Timbergen, Melissa Vos, Guillaume A. Padmos, Wouter Kessels, David Hanff, Dirk J. Grunhagen, Cornelis Verhoef, Stefan Sleijfer, Martin J. van den Bent, Marion Smits, Roy S. Dwarkasing, Christopher J. Els, Federico Fiduzi, Geert J. L. H. van Leenders, Anela Blazevic, Johannes Hofland, Tessa Brabander, Renza A. H. van Gils, Gaston J. H. Franssen, Richard A. Feelders, Wouter W. de Herder, Florian E. Buisman, Francois E. J. A. Willemssen, Bas Groot Koerkamp, Lindsay Angus, Astrid A. M. van der Veldt, Ana Rajicic, Arlette E. Odink, Mitchell Deen, Jose M. Castillo T., Jifke Veenland, Ivo Schoots, Michel Renckens, Michail Doukas, Rob A. de Man, Jan N. M. IJzermans, Razvan L. Miclea, Peter B. Vermeulen, Esther E. Bron, Maarten G. Thomeer, Jacob J. Visser, Wiro J. Niessen, Stefan Klein

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* 29 pages, 3 figures, 4 tables, 2 supplementary figures, 1 supplementary table, submitted to Medical Image Analysis 
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Longitudinal diffusion MRI analysis using Segis-Net: a single-step deep-learning framework for simultaneous segmentation and registration


Dec 28, 2020
Bo Li, Wiro J. Niessen, Stefan Klein, Marius de Groot, M. Arfan Ikram, Meike W. Vernooij, Esther E. Bron

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Figure 1 for Longitudinal diffusion MRI analysis using Segis-Net: a single-step deep-learning framework for simultaneous segmentation and registration
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* Under review 
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Cross-Cohort Generalizability of Deep and Conventional Machine Learning for MRI-based Diagnosis and Prediction of Alzheimer's Disease


Dec 16, 2020
Esther E. Bron, Stefan Klein, Janne M. Papma, Lize C. Jiskoot, Vikram Venkatraghavan, Jara Linders, Pauline Aalten, Peter Paul De Deyn, Geert Jan Biessels, Jurgen A. H. R. Claassen, Huub A. M. Middelkoop, Marion Smits, Wiro J. Niessen, John C. van Swieten, Wiesje M. van der Flier, Inez H. G. B. Ramakers, Aad van der Lugt

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Learning unbiased registration and joint segmentation: evaluation on longitudinal diffusion MRI


Nov 03, 2020
Bo Li, Wiro J. Niessen, Stefan Klein, M. Arfan Ikram, Meike W. Vernooij, Esther E. Bron

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Figure 1 for Learning unbiased registration and joint segmentation: evaluation on longitudinal diffusion MRI
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* Accepted by SPIE Medical Imaging 2021 for oral presentation 
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Differential diagnosis and molecular stratification of gastrointestinal stromal tumors on CT images using a radiomics approach


Oct 15, 2020
Martijn P. A. Starmans, Milea J. M. Timbergen, Melissa Vos, Michel Renckens, Dirk J. Grünhagen, Geert J. L. H. van Leenders, Roy S. Dwarkasing, François E. J. A. Willemssen, Wiro J. Niessen, Cornelis Verhoef, Stefan Sleijfer, Jacob J. Visser, Stefan Klein

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Figure 1 for Differential diagnosis and molecular stratification of gastrointestinal stromal tumors on CT images using a radiomics approach
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Figure 4 for Differential diagnosis and molecular stratification of gastrointestinal stromal tumors on CT images using a radiomics approach
* Martijn P.A. Starmans and Milea J.M. Timbergen contributed equally 
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WHO 2016 subtyping and automated segmentation of glioma using multi-task deep learning


Oct 09, 2020
Sebastian R. van der Voort, Fatih Incekara, Maarten M. J. Wijnenga, Georgios Kapsas, Renske Gahrmann, Joost W. Schouten, Rishi Nandoe Tewarie, Geert J. Lycklama, Philip C. De Witt Hamer, Roelant S. Eijgelaar, Pim J. French, Hendrikus J. Dubbink, Arnaud J. P. E. Vincent, Wiro J. Niessen, Martin J. van den Bent, Marion Smits, Stefan Klein

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autoTICI: Automatic Brain Tissue Reperfusion Scoring on 2D DSA Images of Acute Ischemic Stroke Patients


Oct 06, 2020
Ruisheng Su, Sandra A. P. Cornelissen, Matthijs van der Sluijs, Adriaan C. G. M. van Es, Wim H. van Zwam, Diederik W. J. Dippel, Geert Lycklama, Pieter Jan van Doormaal, Wiro J. Niessen, Aad van der Lugt, Theo van Walsum

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Figure 1 for autoTICI: Automatic Brain Tissue Reperfusion Scoring on 2D DSA Images of Acute Ischemic Stroke Patients
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* 10 pages; submitted to IEEE TMI 
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Analyzing the effect of APOE on Alzheimer's disease progression using an event-based model for stratified populations


Sep 15, 2020
Vikram Venkatraghavan, Stefan Klein, Lana Fani, Leontine S. Ham, Henri Vrooman, M. Kamran Ikram, Wiro J. Niessen, Esther E. Bron

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