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A Petri Dish for Histopathology Image Analysis

Jan 29, 2021
Jerry Wei, Arief Suriawinata, Bing Ren, Xiaoying Liu, Mikhail Lisovsky, Louis Vaickus, Charles Brown, Michael Baker, Naofumi Tomita, Lorenzo Torresani, Jason Wei, Saeed Hassanpour


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Resolution-Based Distillation for Efficient Histology Image Classification

Jan 11, 2021
Joseph DiPalma, Arief A. Suriawinata, Laura J. Tafe, Lorenzo Torresani, Saeed Hassanpour


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Development and Evaluation of a Deep Neural Network for Histologic Classification of Renal Cell Carcinoma on Biopsy and Surgical Resection Slides

Oct 30, 2020
Mengdan Zhu, Bing Ren, Ryland Richards, Matthew Suriawinata, Naofumi Tomita, Saeed Hassanpour


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Sensitivity and Specificity Evaluation of Deep Learning Models for Detection of Pneumoperitoneum on Chest Radiographs

Oct 17, 2020
Manu Goyal, Judith Austin-Strohbehn, Sean J. Sun, Karen Rodriguez, Jessica M. Sin, Yvonne Y. Cheung, Saeed Hassanpour

* 21 Pages, 4 Tables and 6 Figures 

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Deep Learning in Diabetic Foot Ulcers Detection: A Comprehensive Evaluation

Oct 15, 2020
Moi Hoon Yap, Ryo Hachiuma, Azadeh Alavi, Raphael Brungel, Manu Goyal, Hongtao Zhu, Bill Cassidy, Johannes Ruckert, Moshe Olshansky, Xiao Huang, Hideo Saito, Saeed Hassanpour, Christoph M. Friedrich, David Ascher, Anping Song, Hiroki Kajita, David Gillespie, Neil D. Reeves, Joseph Pappachan, Claire O'Shea, Eibe Frank

* 18 pages, 17 figures, 10 tables 

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Learn like a Pathologist: Curriculum Learning by Annotator Agreement for Histopathology Image Classification

Sep 29, 2020
Jerry Wei, Arief Suriawinata, Bing Ren, Xiaoying Liu, Mikhail Lisovsky, Louis Vaickus, Charles Brown, Michael Baker, Mustafa Nasir-Moin, Naofumi Tomita, Lorenzo Torresani, Jason Wei, Saeed Hassanpour


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A Refined Deep Learning Architecture for Diabetic Foot Ulcers Detection

Jul 15, 2020
Manu Goyal, Saeed Hassanpour

* 8 Pages and DFUC Challenge 

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Difficulty Translation in Histopathology Images

Apr 27, 2020
Jerry Wei, Arief Suriawinata, Xiaoying Liu, Bing Ren, Mustafa Nasir-Moin, Naofumi Tomita, Jason Wei, Saeed Hassanpour

* Submitted to 2020 Artificial Intelligence in Medicine (AIME) conference 

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Multi-Ontology Refined Embeddings (MORE): A Hybrid Multi-Ontology and Corpus-based Semantic Representation for Biomedical Concepts

Apr 14, 2020
Steven Jiang, Weiyi Wu, Naofumi Tomita, Craig Ganoe, Saeed Hassanpour


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Artificial Intelligence-Based Image Classification for Diagnosis of Skin Cancer: Challenges and Opportunities

Dec 05, 2019
Manu Goyal, Thomas Knackstedt, Shaofeng Yan, Amanda Oakley, Saeed Hassanpour


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Self-Supervised Contextual Language Representation of Radiology Reports to Improve the Identification of Communication Urgency

Dec 05, 2019
Xing Meng, Craig H. Ganoe, Ryan T. Sieberg, Yvonne Y. Cheung, Saeed Hassanpour

* Accepted in AMIA 2020 Informatics Summit 

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Artificial Intelligence for Diagnosis of Skin Cancer: Challenges and Opportunities

Nov 26, 2019
Manu Goyal, Thomas Knackstedt, Shaofeng Yan, Amanda Oakley, Saeed Hassanpour


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Automatic Post-Stroke Lesion Segmentation on MR Images using 3D Residual Convolutional Neural Network

Nov 25, 2019
Naofumi Tomita, Steven Jiang, Matthew E. Maeder, Saeed Hassanpour


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Predicting colorectal polyp recurrence using time-to-event analysis of medical records

Nov 18, 2019
Lia X. Harrington, Jason W. Wei, Arief A. Suriawinata, Todd A. Mackenzie, Saeed Hassanpour

* Accepted in AMIA 2020 Informatics Summit 

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Generative Image Translation for Data Augmentation in Colorectal Histopathology Images

Oct 13, 2019
Jerry Wei, Arief Suriawinata, Louis Vaickus, Bing Ren, Xiaoying Liu, Jason Wei, Saeed Hassanpour

* NeurIPS 2019 Machine Learning for Health Workshop Full Paper (19/111 accepted papers = 17% acceptance rate) 

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Deep neural networks for automated classification of colorectal polyps on histopathology slides: A multi-institutional evaluation

Sep 27, 2019
Jason W. Wei, Arief A. Suriawinata, Louis J. Vaickus, Bing Ren, Xiaoying Liu, Mikhail Lisovsky, Naofumi Tomita, Behnaz Abdollahi, Adam S. Kim, Dale C. Snover, John A. Baron, Elizabeth L. Barry, Saeed Hassanpour


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Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks

Jan 31, 2019
Jason W. Wei, Laura J. Tafe, Yevgeniy A. Linnik, Louis J. Vaickus, Naofumi Tomita, Saeed Hassanpour


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Automated detection of celiac disease on duodenal biopsy slides: a deep learning approach

Jan 31, 2019
Jason W. Wei, Jerry W. Wei, Christopher R. Jackson, Bing Ren, Arief A. Suriawinata, Saeed Hassanpour

* Accepted in Journal of Pathology Informatics 

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Finding a Needle in the Haystack: Attention-Based Classification of High Resolution Microscopy Images

Nov 20, 2018
Naofumi Tomita, Behnaz Abdollahi, Jason Wei, Bing Ren, Arief Suriawinata, Saeed Hassanpour


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Deep-Learning for Classification of Colorectal Polyps on Whole-Slide Images

Apr 12, 2017
Bruno Korbar, Andrea M. Olofson, Allen P. Miraflor, Katherine M. Nicka, Matthew A. Suriawinata, Lorenzo Torresani, Arief A. Suriawinata, Saeed Hassanpour


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