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The MICCAI Hackathon on reproducibility, diversity, and selection of papers at the MICCAI conference


Mar 04, 2021
Fabian Balsiger, Alain Jungo, Naren Akash R J, Jianan Chen, Ivan Ezhov, Shengnan Liu, Jun Ma, Johannes C. Paetzold, Vishva Saravanan R, Anjany Sekuboyina, Suprosanna Shit, Yannick Suter, Moshood Yekini, Guodong Zeng, Markus Rempfler


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pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis


Oct 07, 2020
Alain Jungo, Olivier Scheidegger, Mauricio Reyes, Fabian Balsiger

* first and last author contributed equally 

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Learning Bloch Simulations for MR Fingerprinting by Invertible Neural Networks


Aug 10, 2020
Fabian Balsiger, Alain Jungo, Olivier Scheidegger, Benjamin Marty, Mauricio Reyes

* Accepted at MICCAI MLMIR 2020 

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Spatially Regularized Parametric Map Reconstruction for Fast Magnetic Resonance Fingerprinting


Nov 09, 2019
Fabian Balsiger, Alain Jungo, Olivier Scheidegger, Pierre G. Carlier, Mauricio Reyes, Benjamin Marty


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Assessing Reliability and Challenges of Uncertainty Estimations for Medical Image Segmentation


Jul 07, 2019
Alain Jungo, Mauricio Reyes

* Appears in Medical Image Computing and Computer Assisted Interventions (MICCAI), 2019 

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Deep Learning versus Classical Regression for Brain Tumor Patient Survival Prediction


Nov 12, 2018
Yannick Suter, Alain Jungo, Michael Rebsamen, Urspeter Knecht, Evelyn Herrmann, Roland Wiest, Mauricio Reyes

* Contribution to The International Multimodal Brain Tumor Segmentation (BraTS) Challenge 2018, survival prediction task 

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Uncertainty-driven Sanity Check: Application to Postoperative Brain Tumor Cavity Segmentation


Jun 08, 2018
Alain Jungo, Raphael Meier, Ekin Ermis, Evelyn Herrmann, Mauricio Reyes

* Appears in Medical Imaging with Deep Learning (MIDL), 2018 

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On the Effect of Inter-observer Variability for a Reliable Estimation of Uncertainty of Medical Image Segmentation


Jun 07, 2018
Alain Jungo, Raphael Meier, Ekin Ermis, Marcela Blatti-Moreno, Evelyn Herrmann, Roland Wiest, Mauricio Reyes

* Appears in Medical Image Computing and Computer Assisted Interventions (MICCAI), 2018 

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Perturb-and-MPM: Quantifying Segmentation Uncertainty in Dense Multi-Label CRFs


Mar 02, 2017
Raphael Meier, Urspeter Knecht, Alain Jungo, Roland Wiest, Mauricio Reyes

* Deactivated review mode (line spacing) 

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