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Transfer Learning in Electronic Health Records through Clinical Concept Embedding


Jul 27, 2021
Jose Roberto Ayala Solares, Yajie Zhu, Abdelaali Hassaine, Shishir Rao, Yikuan Li, Mohammad Mamouei, Dexter Canoy, Kazem Rahimi, Gholamreza Salimi-Khorshidi


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Hi-BEHRT: Hierarchical Transformer-based model for accurate prediction of clinical events using multimodal longitudinal electronic health records


Jun 21, 2021
Yikuan Li, Mohammad Mamouei, Gholamreza Salimi-Khorshidi, Shishir Rao, Abdelaali Hassaine, Dexter Canoy, Thomas Lukasiewicz, Kazem Rahimi


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Risk factor identification for incident heart failure using neural network distillation and variable selection


Mar 01, 2021
Yikuan Li, Shishir Rao, Mohammad Mamouei, Gholamreza Salimi-Khorshidi, Dexter Canoy, Abdelaali Hassaine, Thomas Lukasiewicz, Kazem Rahimi


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An explainable Transformer-based deep learning model for the prediction of incident heart failure


Jan 27, 2021
Shishir Rao, Yikuan Li, Rema Ramakrishnan, Abdelaali Hassaine, Dexter Canoy, John Cleland, Thomas Lukasiewicz, Gholamreza Salimi-Khorshidi, Kazem Rahimi


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A Comparison of Pre-trained Vision-and-Language Models for Multimodal Representation Learning across Medical Images and Reports


Sep 03, 2020
Yikuan Li, Hanyin Wang, Yuan Luo

* 10 pages, 3 figures, submitted to BIBM2020 

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Deep Bayesian Gaussian Processes for Uncertainty Estimation in Electronic Health Records


Mar 23, 2020
Yikuan Li, Shishir Rao, Abdelaali Hassaine, Rema Ramakrishnan, Yajie Zhu, Dexter Canoy, Gholamreza Salimi-Khorshidi, Thomas Lukasiewicz, Kazem Rahimi

* 21 pages 

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BEHRT: Transformer for Electronic Health Records


Jul 22, 2019
Yikuan Li, Shishir Rao, Jose Roberto Ayala Solares, Abdelaali Hassaine, Dexter Canoy, Yajie Zhu, Kazem Rahimi, Gholamreza Salimi-Khorshidi

* Shishir Rao and Yikuan Li have equally contributed to this work as first authors. Shishir Rao is Corresponding Author for this work 

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Learning Multimorbidity Patterns from Electronic Health Records Using Non-negative Matrix Factorisation


Jul 19, 2019
Abdelaali Hassaine, Dexter Canoy, Jose Roberto Ayala Solares, Yajie Zhu, Shishir Rao, Yikuan Li, Kazem Rahimi, Gholamreza Salimi-Khorshidi


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Performance Measurement for Deep Bayesian Neural Network


Mar 22, 2019
Yikuan Li, Yajie Zhu

* university requires the paper going through a standard procedure before publish, the paper will be published again after the procedure 

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Early Prediction of Acute Kidney Injury in Critical Care Setting Using Clinical Notes


Nov 09, 2018
Yikuan Li, Liang Yao, Chengsheng Mao, Anand Srivastava, Xiaoqian Jiang, Yuan Luo

* 4 pages, 3 figures, accepted by BIBM 2018 

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