BLEG: LLM Functions as Powerful fMRI Graph-Enhancer for Brain Network Analysis

Graph Neural Networks (GNNs) have been widely used in diverse brain network analysis tasks based on preprocessed functional magnetic resonance imaging (fMRI) data. However, their performances are constrained due to high feature sparsity and inherent limitations of domain knowledge within uni-modal neurographs. Meanwhile, large language models (LLMs) have demonstrated powerful representation capabilities. Combining LLMs with GNNs presents a promising direction for brain network analysis. While LLMs and MLLMs have emerged in neuroscience, integration of LLMs with graph-based data remains unexplored. In this work, we deal with these issues by incorporating LLM's powerful representation and generalization capabilities. Considering great cost for directly tuning LLMs, we instead function LLM as enhancer to boost GNN's performance on downstream tasks. Our method, namely BLEG, can be divided into three stages. We firstly prompt LLM to get augmented texts for fMRI graph data, then we design a LLM-LM instruction tuning method to get enhanced textual representations at a relatively lower cost. GNN is trained together for coarsened alignment. Finally we finetune an adapter after GNN for given downstream tasks. Alignment loss between LM and GNN logits is designed to further enhance GNN's representation. Extensive experiments on different datasets confirmed BLEG's superiority.

Topology-Aware Dynamic Reweighting for Distribution Shifts on Graph

Graph Neural Networks (GNNs) are widely used for node classification tasks but often fail to generalize when training and test nodes come from different distributions, limiting their practicality. To overcome this, recent approaches adopt invariant learning techniques from the out-of-distribution (OOD) generalization field, which seek to establish stable prediction methods across environments. However, the applicability of these invariant assumptions to graph data remains unverified, and such methods often lack solid theoretical support. In this work, we introduce the Topology-Aware Dynamic Reweighting (TAR) framework, which dynamically adjusts sample weights through gradient flow in the geometric Wasserstein space during training. Instead of relying on strict invariance assumptions, we prove that our method is able to provide distributional robustness, thereby enhancing the out-of-distribution generalization performance on graph data. By leveraging the inherent graph structure, TAR effectively addresses distribution shifts. Our framework's superiority is demonstrated through standard testing on four graph OOD datasets and three class-imbalanced node classification datasets, exhibiting marked improvements over existing methods.