3D Brainformer: 3D Fusion Transformer for Brain Tumor Segmentation

Magnetic resonance imaging (MRI) is critically important for brain mapping in both scientific research and clinical studies. Precise segmentation of brain tumors facilitates clinical diagnosis, evaluations, and surgical planning. Deep learning has recently emerged to improve brain tumor segmentation and achieved impressive results. Convolutional architectures are widely used to implement those neural networks. By the nature of limited receptive fields, however, those architectures are subject to representing long-range spatial dependencies of the voxel intensities in MRI images. Transformers have been leveraged recently to address the above limitations of convolutional networks. Unfortunately, the majority of current Transformers-based methods in segmentation are performed with 2D MRI slices, instead of 3D volumes. Moreover, it is difficult to incorporate the structures between layers because each head is calculated independently in the Multi-Head Self-Attention mechanism (MHSA). In this work, we proposed a 3D Transformer-based segmentation approach. We developed a Fusion-Head Self-Attention mechanism (FHSA) to combine each attention head through attention logic and weight mapping, for the exploration of the long-range spatial dependencies in 3D MRI images. We implemented a plug-and-play self-attention module, named the Infinite Deformable Fusion Transformer Module (IDFTM), to extract features on any deformable feature maps. We applied our approach to the task of brain tumor segmentation, and assessed it on the public BRATS datasets. The experimental results demonstrated that our proposed approach achieved superior performance, in comparison to several state-of-the-art segmentation methods.

LARSEN-ELM: Selective Ensemble of Extreme Learning Machines using LARS for Blended Data

Extreme learning machine (ELM) as a neural network algorithm has shown its good performance, such as fast speed, simple structure etc, but also, weak robustness is an unavoidable defect in original ELM for blended data. We present a new machine learning framework called LARSEN-ELM for overcoming this problem. In our paper, we would like to show two key steps in LARSEN-ELM. In the first step, preprocessing, we select the input variables highly related to the output using least angle regression (LARS). In the second step, training, we employ Genetic Algorithm (GA) based selective ensemble and original ELM. In the experiments, we apply a sum of two sines and four datasets from UCI repository to verify the robustness of our approach. The experimental results show that compared with original ELM and other methods such as OP-ELM, GASEN-ELM and LSBoost, LARSEN-ELM significantly improve robustness performance while keeping a relatively high speed.

Robust OS-ELM with a novel selective ensemble based on particle swarm optimization

In this paper, a robust online sequential extreme learning machine (ROS-ELM) is proposed. It is based on the original OS-ELM with an adaptive selective ensemble framework. Two novel insights are proposed in this paper. First, a novel selective ensemble algorithm referred to as particle swarm optimization selective ensemble (PSOSEN) is proposed. Noting that PSOSEN is a general selective ensemble method which is applicable to any learning algorithms, including batch learning and online learning. Second, an adaptive selective ensemble framework for online learning is designed to balance the robustness and complexity of the algorithm. Experiments for both regression and classification problems with UCI data sets are carried out. Comparisons between OS-ELM, simple ensemble OS-ELM (EOS-ELM) and the proposed ROS-ELM empirically show that ROS-ELM significantly improves the robustness and stability.