Multiple Kronecker RLS fusion-based link propagation for drug-side effect prediction

Drug-side effect prediction has become an essential area of research in the field of pharmacology. As the use of medications continues to rise, so does the importance of understanding and mitigating the potential risks associated with them. At present, researchers have turned to data-driven methods to predict drug-side effects. Drug-side effect prediction is a link prediction problem, and the related data can be described from various perspectives. To process these kinds of data, a multi-view method, called Multiple Kronecker RLS fusion-based link propagation (MKronRLSF-LP), is proposed. MKronRLSF-LP extends the Kron-RLS by finding the consensus partitions and multiple graph Laplacian constraints in the multi-view setting. Both of these multi-view settings contribute to a higher quality result. Extensive experiments have been conducted on drug-side effect datasets, and our empirical results provide evidence that our approach is effective and robust.

Expected Grad-CAM: Towards gradient faithfulness

Although input-gradients techniques have evolved to mitigate and tackle the challenges associated with gradients, modern gradient-weighted CAM approaches still rely on vanilla gradients, which are inherently susceptible to the saturation phenomena. Despite recent enhancements have incorporated counterfactual gradient strategies as a mitigating measure, these local explanation techniques still exhibit a lack of sensitivity to their baseline parameter. Our work proposes a gradient-weighted CAM augmentation that tackles both the saturation and sensitivity problem by reshaping the gradient computation, incorporating two well-established and provably approaches: Expected Gradients and kernel smoothing. By revisiting the original formulation as the smoothed expectation of the perturbed integrated gradients, one can concurrently construct more faithful, localized and robust explanations which minimize infidelity. Through fine modulation of the perturbation distribution it is possible to regulate the complexity characteristic of the explanation, selectively discriminating stable features. Our technique, Expected Grad-CAM, differently from recent works, exclusively optimizes the gradient computation, purposefully designed as an enhanced substitute of the foundational Grad-CAM algorithm and any method built therefrom. Quantitative and qualitative evaluations have been conducted to assess the effectiveness of our method.

Deep Network Pruning: A Comparative Study on CNNs in Face Recognition

The widespread use of mobile devices for all kind of transactions makes necessary reliable and real-time identity authentication, leading to the adoption of face recognition (FR) via the cameras embedded in such devices. Progress of deep Convolutional Neural Networks (CNNs) has provided substantial advances in FR. Nonetheless, the size of state-of-the-art architectures is unsuitable for mobile deployment, since they often encompass hundreds of megabytes and millions of parameters. We address this by studying methods for deep network compression applied to FR. In particular, we apply network pruning based on Taylor scores, where less important filters are removed iteratively. The method is tested on three networks based on the small SqueezeNet (1.24M parameters) and the popular MobileNetv2 (3.5M) and ResNet50 (23.5M) architectures. These have been selected to showcase the method on CNNs with different complexities and sizes. We observe that a substantial percentage of filters can be removed with minimal performance loss. Also, filters with the highest amount of output channels tend to be removed first, suggesting that high-dimensional spaces within popular CNNs are over-dimensionated.

Mixture of Experts Using Tensor Products

In multi-task learning, the conventional approach involves training a model on multiple tasks simultaneously. However, the training signals from different tasks can interfere with one another, potentially leading to \textit{negative transfer}. To mitigate this, we investigate if modular language models can facilitate positive transfer and systematic generalization. Specifically, we propose a novel modular language model (\texttt{TensorPoly}), that balances parameter efficiency with nuanced routing methods. For \textit{modules}, we reparameterize Low-Rank Adaptation (\texttt{LoRA}) by employing an entangled tensor through the use of tensor product operations and name the resulting approach \texttt{TLoRA}. For \textit{routing function}, we tailor two innovative routing functions according to the granularity: \texttt{TensorPoly-I} which directs to each rank within the entangled tensor while \texttt{TensorPoly-II} offers a finer-grained routing approach targeting each order of the entangled tensor. The experimental results from the multi-task T0-benchmark demonstrate that: 1) all modular LMs surpass the corresponding dense approaches, highlighting the potential of modular language models to mitigate negative inference in multi-task learning and deliver superior outcomes. 2) \texttt{TensorPoly-I} achieves higher parameter efficiency in adaptation and outperforms other modular LMs, which shows the potential of our approach in multi-task transfer learning.

Physics-incorporated Graph Neural Network for Multivariate Time Series Imputation

Exploring the missing values is an essential but challenging issue due to the complex latent spatio-temporal correlation and dynamic nature of time series. Owing to the outstanding performance in dealing with structure learning potentials, Graph Neural Networks (GNNs) and Recurrent Neural Networks (RNNs) are often used to capture such complex spatio-temporal features in multivariate time series. However, these data-driven models often fail to capture the essential spatio-temporal relationships when significant signal corruption occurs. Additionally, calculating the high-order neighbor nodes in these models is of high computational complexity. To address these problems, we propose a novel higher-order spatio-temporal physics-incorporated GNN (HSPGNN). Firstly, the dynamic Laplacian matrix can be obtained by the spatial attention mechanism. Then, the generic inhomogeneous partial differential equation (PDE) of physical dynamic systems is used to construct the dynamic higher-order spatio-temporal GNN to obtain the missing time series values. Moreover, we estimate the missing impact by Normalizing Flows (NF) to evaluate the importance of each node in the graph for better explainability. Experimental results on four benchmark datasets demonstrate the effectiveness of HSPGNN and the superior performance when combining various order neighbor nodes. Also, graph-like optical flow, dynamic graphs, and missing impact can be obtained naturally by HSPGNN, which provides better dynamic analysis and explanation than traditional data-driven models. Our code is available at https://github.com/gorgen2020/HSPGNN.

Predicting Overtakes in Trucks Using CAN Data

Safe overtakes in trucks are crucial to prevent accidents, reduce congestion, and ensure efficient traffic flow, making early prediction essential for timely and informed driving decisions. Accordingly, we investigate the detection of truck overtakes from CAN data. Three classifiers, Artificial Neural Networks (ANN), Random Forest, and Support Vector Machines (SVM), are employed for the task. Our analysis covers up to 10 seconds before the overtaking event, using an overlapping sliding window of 1 second to extract CAN features. We observe that the prediction scores of the overtake class tend to increase as we approach the overtake trigger, while the no-overtake class remain stable or oscillates depending on the classifier. Thus, the best accuracy is achieved when approaching the trigger, making early overtaking prediction challenging. The classifiers show good accuracy in classifying overtakes (Recall/TPR > 93%), but accuracy is suboptimal in classifying no-overtakes (TNR typically 80-90% and below 60% for one SVM variant). We further combine two classifiers (Random Forest and linear SVM) by averaging their output scores. The fusion is observed to improve no-overtake classification (TNR > 92%) at the expense of reducing overtake accuracy (TPR). However, the latter is kept above 91% near the overtake trigger. Therefore, the fusion balances TPR and TNR, providing more consistent performance than individual classifiers.

Pushing The Limit of LLM Capacity for Text Classification

The value of text classification's future research has encountered challenges and uncertainties, due to the extraordinary efficacy demonstrated by large language models (LLMs) across numerous downstream NLP tasks. In this era of open-ended language modeling, where task boundaries are gradually fading, an urgent question emerges: have we made significant advances in text classification under the full benefit of LLMs? To answer this question, we propose RGPT, an adaptive boosting framework tailored to produce a specialized text classification LLM by recurrently ensembling a pool of strong base learners. The base learners are constructed by adaptively adjusting the distribution of training samples and iteratively fine-tuning LLMs with them. Such base learners are then ensembled to be a specialized text classification LLM, by recurrently incorporating the historical predictions from the previous learners. Through a comprehensive empirical comparison, we show that RGPT significantly outperforms 8 SOTA PLMs and 7 SOTA LLMs on four benchmarks by 1.36% on average. Further evaluation experiments show a clear surpassing of RGPT over human classification.

Climate Change from Large Language Models

Climate change presents significant challenges to the global community, and it is imperative to raise widespread awareness of the climate crisis and educate users about low-carbon living. Artificial intelligence, particularly large language models (LLMs), have emerged as powerful tools in mitigating the climate crisis, leveraging their extensive knowledge, broad user base, and natural language interaction capabilities. However, despite the growing body of research on climate change, there is a lack of comprehensive assessments of climate crisis knowledge within LLMs. This paper aims to resolve this gap by proposing an automatic evaluation framework. We employ a hybrid approach to data acquisition that combines data synthesis and manual collection to compile a diverse set of questions related to the climate crisis. These questions cover various aspects of climate change, including its causes, impacts, mitigation strategies, and adaptation measures. We then evaluate the model knowledge through prompt engineering based on the collected questions and generated answers. We propose a set of comprehensive metrics to evaluate the climate crisis knowledge, incorporating indicators from 10 different perspectives. Experimental results show that our method is effective in evaluating the knowledge of LLMs regarding the climate crisis. We evaluate several state-of-the-art LLMs and find that their knowledge falls short in terms of timeliness.

Occluded Person Re-Identification with Deep Learning: A Survey and Perspectives

Person re-identification (Re-ID) technology plays an increasingly crucial role in intelligent surveillance systems. Widespread occlusion significantly impacts the performance of person Re-ID. Occluded person Re-ID refers to a pedestrian matching method that deals with challenges such as pedestrian information loss, noise interference, and perspective misalignment. It has garnered extensive attention from researchers. Over the past few years, several occlusion-solving person Re-ID methods have been proposed, tackling various sub-problems arising from occlusion. However, there is a lack of comprehensive studies that compare, summarize, and evaluate the potential of occluded person Re-ID methods in detail. In this review, we start by providing a detailed overview of the datasets and evaluation scheme used for occluded person Re-ID. Next, we scientifically classify and analyze existing deep learning-based occluded person Re-ID methods from various perspectives, summarizing them concisely. Furthermore, we conduct a systematic comparison among these methods, identify the state-of-the-art approaches, and present an outlook on the future development of occluded person Re-ID.

Towards Subject Agnostic Affective Emotion Recognition

This paper focuses on affective emotion recognition, aiming to perform in the subject-agnostic paradigm based on EEG signals. However, EEG signals manifest subject instability in subject-agnostic affective Brain-computer interfaces (aBCIs), which led to the problem of distributional shift. Furthermore, this problem is alleviated by approaches such as domain generalisation and domain adaptation. Typically, methods based on domain adaptation confer comparatively better results than the domain generalisation methods but demand more computational resources given new subjects. We propose a novel framework, meta-learning based augmented domain adaptation for subject-agnostic aBCIs. Our domain adaptation approach is augmented through meta-learning, which consists of a recurrent neural network, a classifier, and a distributional shift controller based on a sum-decomposable function. Also, we present that a neural network explicating a sum-decomposable function can effectively estimate the divergence between varied domains. The network setting for augmented domain adaptation follows meta-learning and adversarial learning, where the controller promptly adapts to new domains employing the target data via a few self-adaptation steps in the test phase. Our proposed approach is shown to be effective in experiments on a public aBICs dataset and achieves similar performance to state-of-the-art domain adaptation methods while avoiding the use of additional computational resources.