DyCON: Dynamic Uncertainty-aware Consistency and Contrastive Learning for Semi-supervised Medical Image Segmentation

Semi-supervised learning in medical image segmentation leverages unlabeled data to reduce annotation burdens through consistency learning. However, current methods struggle with class imbalance and high uncertainty from pathology variations, leading to inaccurate segmentation in 3D medical images. To address these challenges, we present DyCON, a Dynamic Uncertainty-aware Consistency and Contrastive Learning framework that enhances the generalization of consistency methods with two complementary losses: Uncertainty-aware Consistency Loss (UnCL) and Focal Entropy-aware Contrastive Loss (FeCL). UnCL enforces global consistency by dynamically weighting the contribution of each voxel to the consistency loss based on its uncertainty, preserving high-uncertainty regions instead of filtering them out. Initially, UnCL prioritizes learning from uncertain voxels with lower penalties, encouraging the model to explore challenging regions. As training progress, the penalty shift towards confident voxels to refine predictions and ensure global consistency. Meanwhile, FeCL enhances local feature discrimination in imbalanced regions by introducing dual focal mechanisms and adaptive confidence adjustments into the contrastive principle. These mechanisms jointly prioritizes hard positives and negatives while focusing on uncertain sample pairs, effectively capturing subtle lesion variations under class imbalance. Extensive evaluations on four diverse medical image segmentation datasets (ISLES'22, BraTS'19, LA, Pancreas) show DyCON's superior performance against SOTA methods.

STING-BEE: Towards Vision-Language Model for Real-World X-ray Baggage Security Inspection

Advancements in Computer-Aided Screening (CAS) systems are essential for improving the detection of security threats in X-ray baggage scans. However, current datasets are limited in representing real-world, sophisticated threats and concealment tactics, and existing approaches are constrained by a closed-set paradigm with predefined labels. To address these challenges, we introduce STCray, the first multimodal X-ray baggage security dataset, comprising 46,642 image-caption paired scans across 21 threat categories, generated using an X-ray scanner for airport security. STCray is meticulously developed with our specialized protocol that ensures domain-aware, coherent captions, that lead to the multi-modal instruction following data in X-ray baggage security. This allows us to train a domain-aware visual AI assistant named STING-BEE that supports a range of vision-language tasks, including scene comprehension, referring threat localization, visual grounding, and visual question answering (VQA), establishing novel baselines for multi-modal learning in X-ray baggage security. Further, STING-BEE shows state-of-the-art generalization in cross-domain settings. Code, data, and models are available at https://divs1159.github.io/STING-BEE/.

How Good is my Histopathology Vision-Language Foundation Model? A Holistic Benchmark

Recently, histopathology vision-language foundation models (VLMs) have gained popularity due to their enhanced performance and generalizability across different downstream tasks. However, most existing histopathology benchmarks are either unimodal or limited in terms of diversity of clinical tasks, organs, and acquisition instruments, as well as their partial availability to the public due to patient data privacy. As a consequence, there is a lack of comprehensive evaluation of existing histopathology VLMs on a unified benchmark setting that better reflects a wide range of clinical scenarios. To address this gap, we introduce HistoVL, a fully open-source comprehensive benchmark comprising images acquired using up to 11 various acquisition tools that are paired with specifically crafted captions by incorporating class names and diverse pathology descriptions. Our Histo-VL includes 26 organs, 31 cancer types, and a wide variety of tissue obtained from 14 heterogeneous patient cohorts, totaling more than 5 million patches obtained from over 41K WSIs viewed under various magnification levels. We systematically evaluate existing histopathology VLMs on Histo-VL to simulate diverse tasks performed by experts in real-world clinical scenarios. Our analysis reveals interesting findings, including large sensitivity of most existing histopathology VLMs to textual changes with a drop in balanced accuracy of up to 25% in tasks such as Metastasis detection, low robustness to adversarial attacks, as well as improper calibration of models evident through high ECE values and low model prediction confidence, all of which can affect their clinical implementation.

Hierarchical Self-Supervised Adversarial Training for Robust Vision Models in Histopathology

Adversarial attacks pose significant challenges for vision models in critical fields like healthcare, where reliability is essential. Although adversarial training has been well studied in natural images, its application to biomedical and microscopy data remains limited. Existing self-supervised adversarial training methods overlook the hierarchical structure of histopathology images, where patient-slide-patch relationships provide valuable discriminative signals. To address this, we propose Hierarchical Self-Supervised Adversarial Training (HSAT), which exploits these properties to craft adversarial examples using multi-level contrastive learning and integrate it into adversarial training for enhanced robustness. We evaluate HSAT on multiclass histopathology dataset OpenSRH and the results show that HSAT outperforms existing methods from both biomedical and natural image domains. HSAT enhances robustness, achieving an average gain of 54.31% in the white-box setting and reducing performance drops to 3-4% in the black-box setting, compared to 25-30% for the baseline. These results set a new benchmark for adversarial training in this domain, paving the way for more robust models. Our Code for training and evaluation is available at https://github.com/HashmatShadab/HSAT.

Robust-LLaVA: On the Effectiveness of Large-Scale Robust Image Encoders for Multi-modal Large Language Models

Multi-modal Large Language Models (MLLMs) excel in vision-language tasks but remain vulnerable to visual adversarial perturbations that can induce hallucinations, manipulate responses, or bypass safety mechanisms. Existing methods seek to mitigate these risks by applying constrained adversarial fine-tuning to CLIP vision encoders on ImageNet-scale data, ensuring their generalization ability is preserved. However, this limited adversarial training restricts robustness and broader generalization. In this work, we explore an alternative approach of leveraging existing vision classification models that have been adversarially pre-trained on large-scale data. Our analysis reveals two principal contributions: (1) the extensive scale and diversity of adversarial pre-training enables these models to demonstrate superior robustness against diverse adversarial threats, ranging from imperceptible perturbations to advanced jailbreaking attempts, without requiring additional adversarial training, and (2) end-to-end MLLM integration with these robust models facilitates enhanced adaptation of language components to robust visual features, outperforming existing plug-and-play methodologies on complex reasoning tasks. Through systematic evaluation across visual question-answering, image captioning, and jail-break attacks, we demonstrate that MLLMs trained with these robust models achieve superior adversarial robustness while maintaining favorable clean performance. Our framework achieves 2x and 1.5x average robustness gains in captioning and VQA tasks, respectively, and delivers over 10% improvement against jailbreak attacks. Code and pretrained models will be available at https://github.com/HashmatShadab/Robust-LLaVA.

Test-Time Optimization for Domain Adaptive Open Vocabulary Segmentation

We present Seg-TTO, a novel framework for zero-shot, open-vocabulary semantic segmentation (OVSS), designed to excel in specialized domain tasks. While current open vocabulary approaches show impressive performance on standard segmentation benchmarks under zero-shot settings, they fall short of supervised counterparts on highly domain-specific datasets. We focus on segmentation-specific test-time optimization to address this gap. Segmentation requires an understanding of multiple concepts within a single image while retaining the locality and spatial structure of representations. We propose a novel self-supervised objective adhering to these requirements and use it to align the model parameters with input images at test time. In the textual modality, we learn multiple embeddings for each category to capture diverse concepts within an image, while in the visual modality, we calculate pixel-level losses followed by embedding aggregation operations specific to preserving spatial structure. Our resulting framework termed Seg-TTO is a plug-in-play module. We integrate Seg-TTO with three state-of-the-art OVSS approaches and evaluate across 22 challenging OVSS tasks covering a range of specialized domains. Our Seg-TTO demonstrates clear performance improvements across these establishing new state-of-the-art. Code: https://github.com/UlinduP/SegTTO.

Video-Panda: Parameter-efficient Alignment for Encoder-free Video-Language Models

We present an efficient encoder-free approach for video-language understanding that achieves competitive performance while significantly reducing computational overhead. Current video-language models typically rely on heavyweight image encoders (300M-1.1B parameters) or video encoders (1B-1.4B parameters), creating a substantial computational burden when processing multi-frame videos. Our method introduces a novel Spatio-Temporal Alignment Block (STAB) that directly processes video inputs without requiring pre-trained encoders while using only 45M parameters for visual processing - at least a 6.5$\times$ reduction compared to traditional approaches. The STAB architecture combines Local Spatio-Temporal Encoding for fine-grained feature extraction, efficient spatial downsampling through learned attention and separate mechanisms for modeling frame-level and video-level relationships. Our model achieves comparable or superior performance to encoder-based approaches for open-ended video question answering on standard benchmarks. The fine-grained video question-answering evaluation demonstrates our model's effectiveness, outperforming the encoder-based approaches Video-ChatGPT and Video-LLaVA in key aspects like correctness and temporal understanding. Extensive ablation studies validate our architectural choices and demonstrate the effectiveness of our spatio-temporal modeling approach while achieving 3-4$\times$ faster processing speeds than previous methods. Code is available at \url{https://github.com/jh-yi/Video-Panda}.

UniMed-CLIP: Towards a Unified Image-Text Pretraining Paradigm for Diverse Medical Imaging Modalities

Vision-Language Models (VLMs) trained via contrastive learning have achieved notable success in natural image tasks. However, their application in the medical domain remains limited due to the scarcity of openly accessible, large-scale medical image-text datasets. Existing medical VLMs either train on closed-source proprietary or relatively small open-source datasets that do not generalize well. Similarly, most models remain specific to a single or limited number of medical imaging domains, again restricting their applicability to other modalities. To address this gap, we introduce UniMed, a large-scale, open-source multi-modal medical dataset comprising over 5.3 million image-text pairs across six diverse imaging modalities: X-ray, CT, MRI, Ultrasound, Pathology, and Fundus. UniMed is developed using a data-collection framework that leverages Large Language Models (LLMs) to transform modality-specific classification datasets into image-text formats while incorporating existing image-text data from the medical domain, facilitating scalable VLM pretraining. Using UniMed, we trained UniMed-CLIP, a unified VLM for six modalities that significantly outperforms existing generalist VLMs and matches modality-specific medical VLMs, achieving notable gains in zero-shot evaluations. For instance, UniMed-CLIP improves over BiomedCLIP (trained on proprietary data) by an absolute gain of +12.61, averaged over 21 datasets, while using 3x less training data. To facilitate future research, we release UniMed dataset, training codes, and models at https://github.com/mbzuai-oryx/UniMed-CLIP.

AgriCLIP: Adapting CLIP for Agriculture and Livestock via Domain-Specialized Cross-Model Alignment

Capitalizing on vast amount of image-text data, large-scale vision-language pre-training has demonstrated remarkable zero-shot capabilities and has been utilized in several applications. However, models trained on general everyday web-crawled data often exhibit sub-optimal performance for specialized domains, likely due to domain shift. Recent works have tackled this problem for some domains (e.g., healthcare) by constructing domain-specialized image-text data. However, constructing a dedicated large-scale image-text dataset for sustainable area of agriculture and livestock is still open to research. Further, this domain desires fine-grained feature learning due to the subtle nature of the downstream tasks (e.g, nutrient deficiency detection, livestock breed classification). To address this we present AgriCLIP, a vision-language foundational model dedicated to the domain of agriculture and livestock. First, we propose a large-scale dataset, named ALive, that leverages customized prompt generation strategy to overcome the scarcity of expert annotations. Our ALive dataset covers crops, livestock, and fishery, with around 600,000 image-text pairs. Second, we propose a training pipeline that integrates both contrastive and self-supervised learning to learn both global semantic and local fine-grained domain-specialized features. Experiments on diverse set of 20 downstream tasks demonstrate the effectiveness of AgriCLIP framework, achieving an absolute gain of 7.8\% in terms of average zero-shot classification accuracy, over the standard CLIP adaptation via domain-specialized ALive dataset. Our ALive dataset and code can be accessible at \href{https://github.com/umair1221/AgriCLIP/tree/main}{Github}.

Y-CA-Net: A Convolutional Attention Based Network for Volumetric Medical Image Segmentation

Recent attention-based volumetric segmentation (VS) methods have achieved remarkable performance in the medical domain which focuses on modeling long-range dependencies. However, for voxel-wise prediction tasks, discriminative local features are key components for the performance of the VS models which is missing in attention-based VS methods. Aiming at resolving this issue, we deliberately incorporate the convolutional encoder branch with transformer backbone to extract local and global features in a parallel manner and aggregate them in Cross Feature Mixer Module (CFMM) for better prediction of segmentation mask. Consequently, we observe that the derived model, Y-CT-Net, achieves competitive performance on multiple medical segmentation tasks. For example, on multi-organ segmentation, Y-CT-Net achieves an 82.4% dice score, surpassing well-tuned VS Transformer/CNN-like baselines UNETR/ResNet-3D by 2.9%/1.4%. With the success of Y-CT-Net, we extend this concept with hybrid attention models, that derived Y-CH-Net model, which brings a 3% improvement in terms of HD95 score for same segmentation task. The effectiveness of both models Y-CT-Net and Y-CH-Net verifies our hypothesis and motivates us to initiate the concept of Y-CA-Net, a versatile generic architecture based upon any two encoders and a decoder backbones, to fully exploit the complementary strengths of both convolution and attention mechanisms. Based on experimental results, we argue Y-CA-Net is a key player in achieving superior results for volumetric segmentation.