Descriptive Knowledge Graph in Biomedical Domain

We present a novel system that automatically extracts and generates informative and descriptive sentences from the biomedical corpus and facilitates the efficient search for relational knowledge. Unlike previous search engines or exploration systems that retrieve unconnected passages, our system organizes descriptive sentences as a relational graph, enabling researchers to explore closely related biomedical entities (e.g., diseases treated by a chemical) or indirectly connected entities (e.g., potential drugs for treating a disease). Our system also uses ChatGPT and a fine-tuned relation synthesis model to generate concise and reliable descriptive sentences from retrieved information, reducing the need for extensive human reading effort. With our system, researchers can easily obtain both high-level knowledge and detailed references and interactively steer to the information of interest. We spotlight the application of our system in COVID-19 research, illustrating its utility in areas such as drug repurposing and literature curation.

DimonGen: Diversified Generative Commonsense Reasoning for Explaining Concept Relationships

In this paper, we propose DimonGen, which aims to generate diverse sentences describing concept relationships in various everyday scenarios. To support this, we create a benchmark dataset for this task by adapting the existing CommonGen dataset and propose a two-stage model called MoREE (Mixture of Retrieval-Enhanced Experts) to generate the target sentences. MoREE consists of a mixture of retriever models that retrieve diverse context sentences related to the given concepts, and a mixture of generator models that generate diverse sentences based on the retrieved contexts. We conduct experiments on the DimonGen task and show that MoREE outperforms strong baselines in terms of both the quality and diversity of the generated sentences. Our results demonstrate that MoREE is able to generate diverse sentences that reflect different relationships between concepts, leading to a comprehensive understanding of concept relationships.

DKG: A Descriptive Knowledge Graph for Explaining Relationships between Entities

In this paper, we propose Descriptive Knowledge Graph (DKG) - an open and interpretable form of modeling relationships between entities. In DKGs, relationships between entities are represented by relation descriptions. For instance, the relationship between entities of machine learning and algorithm can be described as "Machine learning explores the study and construction of algorithms that can learn from and make predictions on data." To construct DKGs, we propose a self-supervised learning method to extract relation descriptions with the analysis of dependency patterns and a transformer-based relation description synthesizing model to generate relation descriptions. Experiments demonstrate that our system can extract and generate high-quality relation descriptions for explaining entity relationships.