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The Medical Segmentation Decathlon


Jun 10, 2021
Michela Antonelli, Annika Reinke, Spyridon Bakas, Keyvan Farahani, AnnetteKopp-Schneider, Bennett A. Landman, Geert Litjens, Bjoern Menze, Olaf Ronneberger, Ronald M. Summers, Bram van Ginneken, Michel Bilello, Patrick Bilic, Patrick F. Christ, Richard K. G. Do, Marc J. Gollub, Stephan H. Heckers, Henkjan Huisman, William R. Jarnagin, Maureen K. McHugo, Sandy Napel, Jennifer S. Goli Pernicka, Kawal Rhode, Catalina Tobon-Gomez, Eugene Vorontsov, Henkjan Huisman, James A. Meakin, Sebastien Ourselin, Manuel Wiesenfarth, Pablo Arbelaez, Byeonguk Bae, Sihong Chen, Laura Daza, Jianjiang Feng, Baochun He, Fabian Isensee, Yuanfeng Ji, Fucang Jia, Namkug Kim, Ildoo Kim, Dorit Merhof, Akshay Pai, Beomhee Park, Mathias Perslev, Ramin Rezaiifar, Oliver Rippel, Ignacio Sarasua, Wei Shen, Jaemin Son, Christian Wachinger, Liansheng Wang, Yan Wang, Yingda Xia, Daguang Xu, Zhanwei Xu, Yefeng Zheng, Amber L. Simpson, Lena Maier-Hein, M. Jorge Cardoso


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Improving Pixel Embedding Learning through Intermediate Distance Regression Supervision for Instance Segmentation


Jul 13, 2020
Yuli Wu, Long Chen, Dorit Merhof

* ECCV 2020 Workshop: Computer Vision Problems in Plant Phenotyping (CVPPP 2020) 

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Modeling the Distribution of Normal Data in Pre-Trained Deep Features for Anomaly Detection


May 28, 2020
Oliver Rippel, Patrick Mertens, Dorit Merhof

* First two authors contributed equally to this work 

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AutoML Segmentation for 3D Medical Image Data: Contribution to the MSD Challenge 2018


May 20, 2020
Oliver Rippel, Leon Weninger, Dorit Merhof


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An Asymetric Cycle-Consistency Loss for Dealing with Many-to-One Mappings in Image Translation: A Study on Thigh MR Scans


May 19, 2020
Michael Gadermayr, Maximilian Tschuchnig, Laxmi Gupta, Dorit Merhof, Nils Krämer, Daniel Truhn, Burkhard Gess

* Submitted to MICCAI'20 

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MixNet: Multi-modality Mix Network for Brain Segmentation


Apr 21, 2020
Long Chen, Dorit Merhof

* pp 267-376, MICCAI 2018 Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries 
* BrainLes, MICCAI 2018 

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Instance Segmentation of Biomedical Images with an Object-aware Embedding Learned with Local Constraints


Apr 21, 2020
Long Chen, Martin Strauch, Dorit Merhof

* vol 11764, pp 451-459, MICCAI 2019 
* MICCAI 2019 

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Radiomic Feature Stability Analysis based on Probabilistic Segmentations


Oct 13, 2019
Christoph Haarburger, Justus Schock, Daniel Truhn, Philippe Weitz, Leon Weninger, Dorit Merhof


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Multi Scale Curriculum CNN for Context-Aware Breast MRI Malignancy Classification


Jun 17, 2019
Christoph Haarburger, Michael Baumgartner, Daniel Truhn, Mirjam Broeckmann, Hannah Schneider, Simone Schrading, Christiane Kuhl, Dorit Merhof

* Accepted to MICCAI 2019 

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Super-realtime facial landmark detection and shape fitting by deep regression of shape model parameters


Feb 09, 2019
Marcin Kopaczka, Justus Schock, Dorit Merhof

* https://github.com/justusschock/shapenet 

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Image-based Survival Analysis for Lung Cancer Patients using CNNs


Oct 08, 2018
Christoph Haarburger, Philippe Weitz, Oliver Rippel, Dorit Merhof


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Spherical Harmonic Residual Network for Diffusion Signal Harmonization


Aug 05, 2018
Simon Koppers, Luke Bloy, Jeffrey I. Berman, Chantal M. W. Tax, J. Christopher Edgar, Dorit Merhof

* 10 pages 

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DELIMIT PyTorch - An extension for Deep Learning in Diffusion Imaging


Aug 04, 2018
Simon Koppers, Dorit Merhof


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Unsupervisedly Training GANs for Segmenting Digital Pathology with Automatically Generated Annotations


Aug 01, 2018
Michael Gadermayr, Laxmi Gupta, Barbara M. Klinkhammer, Peter Boor, Dorit Merhof

* Submitted to ISBI'19 

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Context-based Normalization of Histological Stains using Deep Convolutional Features


Aug 14, 2017
Daniel Bug, Steffen Schneider, Anne Grote, Eva Oswald, Friedrich Feuerhake, Julia Schüler, Dorit Merhof

* In: 3rd Workshop on Deep Learning in Medical Image Analysis (DLMIA 2017) 

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CNN Cascades for Segmenting Whole Slide Images of the Kidney


Aug 01, 2017
Michael Gadermayr, Ann-Kathrin Dombrowski, Barbara Mara Klinkhammer, Peter Boor, Dorit Merhof


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Recycle deep features for better object detection


Jul 18, 2016
Wei Li, Matthias Breier, Dorit Merhof


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Automated Image Processing for the Analysis of DNA Repair Dynamics


Jan 18, 2011
Thorsten Riess, Christian Dietz, Martin Tomas, Elisa Ferrando-May, Dorit Merhof


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