Deep Learning for Satellite Image Time Series Analysis: A Review

Earth observation (EO) satellite missions have been providing detailed images about the state of the Earth and its land cover for over 50 years. Long term missions, such as NASA's Landsat, Terra, and Aqua satellites, and more recently, the ESA's Sentinel missions, record images of the entire world every few days. Although single images provide point-in-time data, repeated images of the same area, or satellite image time series (SITS) provide information about the changing state of vegetation and land use. These SITS are useful for modeling dynamic processes and seasonal changes such as plant phenology. They have potential benefits for many aspects of land and natural resource management, including applications in agricultural, forest, water, and disaster management, urban planning, and mining. However, the resulting satellite image time series (SITS) are complex, incorporating information from the temporal, spatial, and spectral dimensions. Therefore, deep learning methods are often deployed as they can analyze these complex relationships. This review presents a summary of the state-of-the-art methods of modelling environmental, agricultural, and other Earth observation variables from SITS data using deep learning methods. We aim to provide a resource for remote sensing experts interested in using deep learning techniques to enhance Earth observation models with temporal information.

Match-And-Deform: Time Series Domain Adaptation through Optimal Transport and Temporal Alignment

While large volumes of unlabeled data are usually available, associated labels are often scarce. The unsupervised domain adaptation problem aims at exploiting labels from a source domain to classify data from a related, yet different, target domain. When time series are at stake, new difficulties arise as temporal shifts may appear in addition to the standard feature distribution shift. In this paper, we introduce the Match-And-Deform (MAD) approach that aims at finding correspondences between the source and target time series while allowing temporal distortions. The associated optimization problem simultaneously aligns the series thanks to an optimal transport loss and the time stamps through dynamic time warping. When embedded into a deep neural network, MAD helps learning new representations of time series that both align the domains and maximize the discriminative power of the network. Empirical studies on benchmark datasets and remote sensing data demonstrate that MAD makes meaningful sample-to-sample pairing and time shift estimation, reaching similar or better classification performance than state-of-the-art deep time series domain adaptation strategies.

Generalized Classification of Satellite Image Time Series with Thermal Positional Encoding

Large-scale crop type classification is a task at the core of remote sensing efforts with applications of both economic and ecological importance. Current state-of-the-art deep learning methods are based on self-attention and use satellite image time series (SITS) to discriminate crop types based on their unique growth patterns. However, existing methods generalize poorly to regions not seen during training mainly due to not being robust to temporal shifts of the growing season caused by variations in climate. To this end, we propose Thermal Positional Encoding (TPE) for attention-based crop classifiers. Unlike previous positional encoding based on calendar time (e.g. day-of-year), TPE is based on thermal time, which is obtained by accumulating daily average temperatures over the growing season. Since crop growth is directly related to thermal time, but not calendar time, TPE addresses the temporal shifts between different regions to improve generalization. We propose multiple TPE strategies, including learnable methods, to further improve results compared to the common fixed positional encodings. We demonstrate our approach on a crop classification task across four different European regions, where we obtain state-of-the-art generalization results.

TimeMatch: Unsupervised Cross-Region Adaptation by Temporal Shift Estimation

The recent developments of deep learning models that capture the complex temporal patterns of crop phenology have greatly advanced crop classification of Satellite Image Time Series (SITS). However, when applied to target regions spatially different from the training region, these models perform poorly without any target labels due to the temporal shift of crop phenology between regions. To address this unsupervised cross-region adaptation setting, existing methods learn domain-invariant features without any target supervision, but not the temporal shift itself. As a consequence, these techniques provide only limited benefits for SITS. In this paper, we propose TimeMatch, a new unsupervised domain adaptation method for SITS that directly accounts for the temporal shift. TimeMatch consists of two components: 1) temporal shift estimation, which estimates the temporal shift of the unlabeled target region with a source-trained model, and 2) TimeMatch learning, which combines temporal shift estimation with semi-supervised learning to adapt a classifier to an unlabeled target region. We also introduce an open-access dataset for cross-region adaptation with SITS from four different regions in Europe. On this dataset, we demonstrate that TimeMatch outperforms all competing methods by 11% in F1-score across five different adaptation scenarios, setting a new state-of-the-art for cross-region adaptation.

Elastic Similarity Measures for Multivariate Time Series Classification

Elastic similarity measures are a class of similarity measures specifically designed to work with time series data. When scoring the similarity between two time series, they allow points that do not correspond in timestamps to be aligned. This can compensate for misalignments in the time axis of time series data, and for similar processes that proceed at variable and differing paces. Elastic similarity measures are widely used in machine learning tasks such as classification, clustering and outlier detection when using time series data. There is a multitude of research on various univariate elastic similarity measures. However, except for multivariate versions of the well known Dynamic Time Warping (DTW) there is a lack of work to generalise other similarity measures for multivariate cases. This paper adapts two existing strategies used in multivariate DTW, namely, Independent and Dependent DTW, to several commonly used elastic similarity measures. Using 23 datasets from the University of East Anglia (UEA) multivariate archive, for nearest neighbour classification, we demonstrate that each measure outperforms all others on at least one dataset and that there are datasets for which either the dependent versions of all measures are more accurate than their independent counterparts or vice versa. This latter finding suggests that these differences arise from a fundamental property of the data. We also show that an ensemble of such nearest neighbour classifiers is highly competitive with other state-of-the-art multivariate time series classifiers.

A Bayesian-inspired, deep learning, semi-supervised domain adaptation technique for land cover mapping

Land cover maps are a vital input variable to many types of environmental research and management. While they can be produced automatically by machine learning techniques, these techniques require substantial training data to achieve high levels of accuracy, which are not always available. One technique researchers use when labelled training data are scarce is domain adaptation (DA) -- where data from an alternate region, known as the source domain, are used to train a classifier and this model is adapted to map the study region, or target domain. The scenario we address in this paper is known as semi-supervised DA, where some labelled samples are available in the target domain. In this paper we present Sourcerer, a Bayesian-inspired, deep learning-based, semi-supervised DA technique for producing land cover maps from SITS data. The technique takes a convolutional neural network trained on a source domain and then trains further on the available target domain with a novel regularizer applied to the model weights. The regularizer adjusts the degree to which the model is modified to fit the target data, limiting the degree of change when the target data are few in number and increasing it as target data quantity increases. Our experiments on Sentinel-2 time series images compare Sourcerer with two state-of-the-art semi-supervised domain adaptation techniques and four baseline models. We show that on two different source-target domain pairings Sourcerer outperforms all other methods for any quantity of labelled target data available. In fact, the results on the more difficult target domain show that the starting accuracy of Sourcerer (when no labelled target data are available), 74.2%, is greater than the next-best state-of-the-art method trained on 20,000 labelled target instances.

InceptionTime: Finding AlexNet for Time Series Classification

Time series classification (TSC) is the area of machine learning interested in learning how to assign labels to time series. The last few decades of work in this area have led to significant progress in the accuracy of classifiers, with the state of the art now represented by the HIVE-COTE algorithm. While extremely accurate, HIVE-COTE is infeasible to use in many applications because of its very high training time complexity in O(N^2*T^4) for a dataset with N time series of length T. For example, it takes HIVE-COTE more than 72,000s to learn from a small dataset with N=700 time series of short length T=46. Deep learning, on the other hand, has now received enormous attention because of its high scalability and state-of-the-art accuracy in computer vision and natural language processing tasks. Deep learning for TSC has only very recently started to be explored, with the first few architectures developed over the last 3 years only. The accuracy of deep learning for TSC has been raised to a competitive level, but has not quite reached the level of HIVE-COTE. This is what this paper achieves: outperforming HIVE-COTE's accuracy together with scalability. We take an important step towards finding the AlexNet network for TSC by presenting InceptionTime---an ensemble of deep Convolutional Neural Network (CNN) models, inspired by the Inception-v4 architecture. Our experiments show that InceptionTime slightly outperforms HIVE-COTE with a win/draw/loss on the UCR archive of 40/6/39. Not only is InceptionTime more accurate, but it is much faster: InceptionTime learns from that same dataset with 700 time series in 2,300s but can also learn from a dataset with 8M time series in 13 hours, a quantity of data that is fully out of reach of HIVE-COTE.

TS-CHIEF: A Scalable and Accurate Forest Algorithm for Time Series Classification

Time Series Classification (TSC) has seen enormous progress over the last two decades. HIVE-COTE (Hierarchical Vote Collective of Transformation-based Ensembles) is the current state of the art in terms of classification accuracy. HIVE-COTE recognizes that time series are a specific data type for which the traditional attribute-value representation, used predominantly in machine learning, fails to provide a relevant representation. HIVE-COTE combines multiple types of classifiers: each extracting information about a specific aspect of a time series, be it in the time domain, frequency domain or summarization of intervals within the series. However, HIVE-COTE (and its predecessor, FLAT-COTE) is often infeasible to run on even modest amounts of data. For instance, training HIVE-COTE on a dataset with only 1,500 time series can require 8 days of CPU time. It has polynomial runtime w.r.t training set size, so this problem compounds as data quantity increases. We propose a novel TSC algorithm, TS-CHIEF, which is highly competitive to HIVE-COTE in accuracy, but requires only a fraction of the runtime. TS-CHIEF constructs an ensemble classifier that integrates the most effective embeddings of time series that research has developed in the last decade. It uses tree-structured classifiers to do so efficiently. We assess TS-CHIEF on 85 datasets of the UCR archive, where it achieves state-of-the-art accuracy with scalability and efficiency. We demonstrate that TS-CHIEF can be trained on 130k time series in 2 days, a data quantity that is beyond the reach of any TSC algorithm with comparable accuracy.

Temporal Convolutional Neural Network for the Classification of Satellite Image Time Series

New remote sensing sensors acquire now high spatial and spectral Satellite Image Time Series (SITS) of the world. These series of images are a key component of any classification framework to obtain up-to-date and accurate land cover maps of the Earth's soils. More specifically, the combination of the temporal, spectral and spatial resolutions of new SITS enables the monitoring of vegetation dynamics. Although some traditional classification algorithms, such as Random Forest (RF), have been successfully applied for SITS classification, these algorithms do not fully take advantage of the temporal domain. Conversely, deep-learning based methods have been successfully used to make the most of sequential data such as text and audio data. For the first time, this paper explores the use of Convolutional Neural Networks (CNNs) with convolutions applied in the temporal dimension for SITS classification. The goal is to quantitatively and qualitatively evaluate the contribution of temporal CNNs for SITS classification. More precisely, this paper proposes a set of experiments performed on a million Formosat-2 time series. The experimental results show that temporal CNNs are 2 to 3 % more accurate than RF. The experiments also highlight some counter-intuitive results on pooling layers: contrary to image classification, their use decreases accuracy. Moreover, we provide some general guidelines on the network architecture, common regularization mechanisms, and hyper-parameter values such as the batch size. Finally, the visual quality of the land cover maps produced by the temporal CNN is assessed.