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LitGen: Genetic Literature Recommendation Guided by Human Explanations


Sep 24, 2019
Allen Nie, Arturo L. Pineda, Matt W. Wright Hannah Wand, Bryan Wulf, Helio A. Costa, Ronak Y. Patel, Carlos D. Bustamante, James Zou

* 12 pages; 5 figures. Accepted by PSB 2020 (Pacific Symposium on Biocomputing) track: Artificial Intelligence for Enhancing Clinical Medicine 

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DeepTag: inferring all-cause diagnoses from clinical notes in under-resourced medical domain


Sep 03, 2018
Allen Nie, Ashley Zehnder, Rodney L. Page, Arturo L. Pineda, Manuel A. Rivas, Carlos D. Bustamante, James Zou

* 17 pages, 6 figures. Updated the text for clarity 

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Network Enhancement: a general method to denoise weighted biological networks


Jun 01, 2018
Bo Wang, Armin Pourshafeie, Marinka Zitnik, Junjie Zhu, Carlos D. Bustamante, Serafim Batzoglou, Jure Leskovec

* Nature Communications, 9:3108, 2018 

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