CIS-UNet: Multi-Class Segmentation of the Aorta in Computed Tomography Angiography via Context-Aware Shifted Window Self-Attention

Advancements in medical imaging and endovascular grafting have facilitated minimally invasive treatments for aortic diseases. Accurate 3D segmentation of the aorta and its branches is crucial for interventions, as inaccurate segmentation can lead to erroneous surgical planning and endograft construction. Previous methods simplified aortic segmentation as a binary image segmentation problem, overlooking the necessity of distinguishing between individual aortic branches. In this paper, we introduce Context Infused Swin-UNet (CIS-UNet), a deep learning model designed for multi-class segmentation of the aorta and thirteen aortic branches. Combining the strengths of Convolutional Neural Networks (CNNs) and Swin transformers, CIS-UNet adopts a hierarchical encoder-decoder structure comprising a CNN encoder, symmetric decoder, skip connections, and a novel Context-aware Shifted Window Self-Attention (CSW-SA) as the bottleneck block. Notably, CSW-SA introduces a unique utilization of the patch merging layer, distinct from conventional Swin transformers. It efficiently condenses the feature map, providing a global spatial context and enhancing performance when applied at the bottleneck layer, offering superior computational efficiency and segmentation accuracy compared to the Swin transformers. We trained our model on computed tomography (CT) scans from 44 patients and tested it on 15 patients. CIS-UNet outperformed the state-of-the-art SwinUNetR segmentation model, which is solely based on Swin transformers, by achieving a superior mean Dice coefficient of 0.713 compared to 0.697, and a mean surface distance of 2.78 mm compared to 3.39 mm. CIS-UNet's superior 3D aortic segmentation offers improved precision and optimization for planning endovascular treatments. Our dataset and code will be publicly available.

CrisisViT: A Robust Vision Transformer for Crisis Image Classification

In times of emergency, crisis response agencies need to quickly and accurately assess the situation on the ground in order to deploy relevant services and resources. However, authorities often have to make decisions based on limited information, as data on affected regions can be scarce until local response services can provide first-hand reports. Fortunately, the widespread availability of smartphones with high-quality cameras has made citizen journalism through social media a valuable source of information for crisis responders. However, analyzing the large volume of images posted by citizens requires more time and effort than is typically available. To address this issue, this paper proposes the use of state-of-the-art deep neural models for automatic image classification/tagging, specifically by adapting transformer-based architectures for crisis image classification (CrisisViT). We leverage the new Incidents1M crisis image dataset to develop a range of new transformer-based image classification models. Through experimentation over the standard Crisis image benchmark dataset, we demonstrate that the CrisisViT models significantly outperform previous approaches in emergency type, image relevance, humanitarian category, and damage severity classification. Additionally, we show that the new Incidents1M dataset can further augment the CrisisViT models resulting in an additional 1.25% absolute accuracy gain.

RIS-Enhanced MIMO Channels in Urban Environments: Experimental Insights

Can the smart radio environment paradigm measurably enhance the performance of contemporary urban macrocells? In this study, we explore the impact of reconfigurable intelligent surfaces (RISs) on a real-world sub-6 GHz MIMO channel. A rooftop-mounted macrocell antenna has been adapted to enable frequency domain channel measurements to be ascertained. A nature-inspired beam search algorithm has been employed to maximize channel gain at user positions, revealing a potential 50% increase in channel capacity in certain circumstances. Analysis reveals, however, that the spatial characteristics of the channel can be adversely affected through the introduction of a RIS in these settings. The RIS prototype schematics, Gerber files, and source code have been made available to aid in future experimental efforts of the wireless research community.

MicroSegNet: A Deep Learning Approach for Prostate Segmentation on Micro-Ultrasound Images

Micro-ultrasound (micro-US) is a novel 29-MHz ultrasound technique that provides 3-4 times higher resolution than traditional ultrasound, delivering comparable accuracy for diagnosing prostate cancer to MRI but at a lower cost. Accurate prostate segmentation is crucial for prostate volume measurement, cancer diagnosis, prostate biopsy, and treatment planning. This paper proposes a deep learning approach for automated, fast, and accurate prostate segmentation on micro-US images. Prostate segmentation on micro-US is challenging due to artifacts and indistinct borders between the prostate, bladder, and urethra in the midline. We introduce MicroSegNet, a multi-scale annotation-guided Transformer UNet model to address this challenge. During the training process, MicroSegNet focuses more on regions that are hard to segment (challenging regions), where expert and non-expert annotations show discrepancies. We achieve this by proposing an annotation-guided cross entropy loss that assigns larger weight to pixels in hard regions and lower weight to pixels in easy regions. We trained our model using micro-US images from 55 patients, followed by evaluation on 20 patients. Our MicroSegNet model achieved a Dice coefficient of 0.942 and a Hausdorff distance of 2.11 mm, outperforming several state-of-the-art segmentation methods, as well as three human annotators with different experience levels. We will make our code and dataset publicly available to promote transparency and collaboration in research.

Image Registration of In Vivo Micro-Ultrasound and Ex Vivo Pseudo-Whole Mount Histopathology Images of the Prostate: A Proof-of-Concept Study

Early diagnosis of prostate cancer significantly improves a patient's 5-year survival rate. Biopsy of small prostate cancers is improved with image-guided biopsy. MRI-ultrasound fusion-guided biopsy is sensitive to smaller tumors but is underutilized due to the high cost of MRI and fusion equipment. Micro-ultrasound (micro-US), a novel high-resolution ultrasound technology, provides a cost-effective alternative to MRI while delivering comparable diagnostic accuracy. However, the interpretation of micro-US is challenging due to subtle gray scale changes indicating cancer vs normal tissue. This challenge can be addressed by training urologists with a large dataset of micro-US images containing the ground truth cancer outlines. Such a dataset can be mapped from surgical specimens (histopathology) onto micro-US images via image registration. In this paper, we present a semi-automated pipeline for registering in vivo micro-US images with ex vivo whole-mount histopathology images. Our pipeline begins with the reconstruction of pseudo-whole-mount histopathology images and a 3D micro-US volume. Each pseudo-whole-mount histopathology image is then registered with the corresponding axial micro-US slice using a two-stage approach that estimates an affine transformation followed by a deformable transformation. We evaluated our registration pipeline using micro-US and histopathology images from 18 patients who underwent radical prostatectomy. The results showed a Dice coefficient of 0.94 and a landmark error of 2.7 mm, indicating the accuracy of our registration pipeline. This proof-of-concept study demonstrates the feasibility of accurately aligning micro-US and histopathology images. To promote transparency and collaboration in research, we will make our code and dataset publicly available.

A large-scale multimodal dataset of human speech recognition

Nowadays, non-privacy small-scale motion detection has attracted an increasing amount of research in remote sensing in speech recognition. These new modalities are employed to enhance and restore speech information from speakers of multiple types of data. In this paper, we propose a dataset contains 7.5 GHz Channel Impulse Response (CIR) data from ultra-wideband (UWB) radars, 77-GHz frequency modulated continuous wave (FMCW) data from millimetre wave (mmWave) radar, and laser data. Meanwhile, a depth camera is adopted to record the landmarks of the subject's lip and voice. Approximately 400 minutes of annotated speech profiles are provided, which are collected from 20 participants speaking 5 vowels, 15 words and 16 sentences. The dataset has been validated and has potential for the research of lip reading and multimodal speech recognition.

RweetMiner: Automatic identification and categorization of help requests on twitter during disasters

Catastrophic events create uncertain situations for humanitarian organizations locating and providing aid to affected people. Many people turn to social media during disasters for requesting help and/or providing relief to others. However, the majority of social media posts seeking help could not properly be detected and remained concealed because often they are noisy and ill-formed. Existing systems lack in planning an effective strategy for tweet preprocessing and grasping the contexts of tweets. This research, first of all, formally defines request tweets in the context of social networking sites, hereafter rweets, along with their different primary types and sub-types. Our main contributions are the identification and categorization of rweets. For rweet identification, we employ two approaches, namely a rule-based and logistic regression, and show their high precision and F1 scores. The rweets classification into sub-types such as medical, food, and shelter, using logistic regression shows promising results and outperforms existing works. Finally, we introduce an architecture to store intermediate data to accelerate the development process of the machine learning classifiers.

CRAFT: Criticality-Aware Fault-Tolerance Enhancement Techniques for Emerging Memories-Based Deep Neural Networks

Deep Neural Networks (DNNs) have emerged as the most effective programming paradigm for computer vision and natural language processing applications. With the rapid development of DNNs, efficient hardware architectures for deploying DNN-based applications on edge devices have been extensively studied. Emerging Non-Volatile Memories (NVMs), with their better scalability, non-volatility and good read performance, are found to be promising candidates for deploying DNNs. However, despite the promise, emerging NVMs often suffer from reliability issues such as stuck-at faults, which decrease the chip yield/memory lifetime and severely impact the accuracy of DNNs. A stuck-at cell can be read but not reprogrammed, thus, stuck-at faults in NVMs may or may not result in errors depending on the data to be stored. By reducing the number of errors caused by stuck-at faults, the reliability of a DNN-based system can be enhanced. This paper proposes CRAFT, i.e., Criticality-Aware Fault-Tolerance Enhancement Techniques to enhance the reliability of NVM-based DNNs in the presence of stuck-at faults. A data block remapping technique is used to reduce the impact of stuck-at faults on DNNs accuracy. Additionally, by performing bit-level criticality analysis on various DNNs, the critical-bit positions in network parameters that can significantly impact the accuracy are identified. Based on this analysis, we propose an encoding method which effectively swaps the critical bit positions with that of non-critical bits when more errors (due to stuck-at faults) are present in the critical bits.

Fine-grained Population Mapping from Coarse Census Counts and Open Geodata

Fine-grained population maps are needed in several domains, like urban planning, environmental monitoring, public health, and humanitarian operations. Unfortunately, in many countries only aggregate census counts over large spatial units are collected, moreover, these are not always up-to-date. We present POMELO, a deep learning model that employs coarse census counts and open geodata to estimate fine-grained population maps with 100m ground sampling distance. Moreover, the model can also estimate population numbers when no census counts at all are available, by generalizing across countries. In a series of experiments for several countries in sub-Saharan Africa, the maps produced with POMELOare in good agreement with the most detailed available reference counts: disaggregation of coarse census counts reaches R2 values of 85-89%; unconstrained prediction in the absence of any counts reaches 48-69%.

A Survey on Computer Vision based Human Analysis in the COVID-19 Era

The emergence of COVID-19 has had a global and profound impact, not only on society as a whole, but also on the lives of individuals. Various prevention measures were introduced around the world to limit the transmission of the disease, including face masks, mandates for social distancing and regular disinfection in public spaces, and the use of screening applications. These developments also triggered the need for novel and improved computer vision techniques capable of (i) providing support to the prevention measures through an automated analysis of visual data, on the one hand, and (ii) facilitating normal operation of existing vision-based services, such as biometric authentication schemes, on the other. Especially important here, are computer vision techniques that focus on the analysis of people and faces in visual data and have been affected the most by the partial occlusions introduced by the mandates for facial masks. Such computer vision based human analysis techniques include face and face-mask detection approaches, face recognition techniques, crowd counting solutions, age and expression estimation procedures, models for detecting face-hand interactions and many others, and have seen considerable attention over recent years. The goal of this survey is to provide an introduction to the problems induced by COVID-19 into such research and to present a comprehensive review of the work done in the computer vision based human analysis field. Particular attention is paid to the impact of facial masks on the performance of various methods and recent solutions to mitigate this problem. Additionally, a detailed review of existing datasets useful for the development and evaluation of methods for COVID-19 related applications is also provided. Finally, to help advance the field further, a discussion on the main open challenges and future research direction is given.