Self-supervised pretraining has been observed to improve performance in supervised learning tasks in medical imaging. This study investigates the utility of self-supervised pretraining prior to conducting supervised fine-tuning for the downstream task of lung sliding classification in M-mode lung ultrasound images. We propose a novel pairwise relationship that couples M-mode images constructed from the same B-mode image and investigate the utility of data augmentation procedure specific to M-mode lung ultrasound. The results indicate that self-supervised pretraining yields better performance than full supervision, most notably for feature extractors not initialized with ImageNet-pretrained weights. Moreover, we observe that including a vast volume of unlabelled data results in improved performance on external validation datasets, underscoring the value of self-supervision for improving generalizability in automatic ultrasound interpretation. To the authors' best knowledge, this study is the first to characterize the influence of self-supervised pretraining for M-mode ultrasound.
We present Recurrence with Correlation Network (RWCNet), a medical image registration network with multi-scale features and a cost volume layer. We demonstrate that these architectural features improve medical image registration accuracy in two image registration datasets prepared for the MICCAI 2022 Learn2Reg Workshop Challenge. On the large-displacement National Lung Screening Test (NLST) dataset, RWCNet is able to achieve a total registration error (TRE) of 2.11mm between corresponding keypoints without instance fine-tuning. On the OASIS brain MRI dataset, RWCNet is able to achieve an average dice overlap of 81.7% for 35 different anatomical labels. It outperforms another multi-scale network, the Laplacian Image Registration Network (LapIRN), on both datasets. Ablation experiments are performed to highlight the contribution of the various architectural features. While multi-scale features improved validation accuracy for both datasets, the cost volume layer and number of recurrent steps only improved performance on the large-displacement NLST dataset. This result suggests that cost volume layer and iterative refinement using RNN provide good support for optimization and generalization in large-displacement medical image registration. The code for RWCNet is available at https://github.com/vigsivan/optimization-based-registration.
There can be numerous electronic components on a given PCB, making the task of visual inspection to detect defects very time-consuming and prone to error, especially at scale. There has thus been significant interest in automatic PCB component detection, particularly leveraging deep learning. However, deep neural networks typically require high computational resources, possibly limiting their feasibility in real-world use cases in manufacturing, which often involve high-volume and high-throughput detection with constrained edge computing resource availability. As a result of an exploration of efficient deep neural network architectures for this use case, we introduce PCBDet, an attention condenser network design that provides state-of-the-art inference throughput while achieving superior PCB component detection performance compared to other state-of-the-art efficient architecture designs. Experimental results show that PCBDet can achieve up to 2$\times$ inference speed-up on an ARM Cortex A72 processor when compared to an EfficientNet-based design while achieving $\sim$2-4\% higher mAP on the FICS-PCB benchmark dataset.
As the Coronavirus Disease 2019 (COVID-19) continues to impact many aspects of life and the global healthcare systems, the adoption of rapid and effective screening methods to prevent further spread of the virus and lessen the burden on healthcare providers is a necessity. As a cheap and widely accessible medical image modality, point-of-care ultrasound (POCUS) imaging allows radiologists to identify symptoms and assess severity through visual inspection of the chest ultrasound images. Combined with the recent advancements in computer science, applications of deep learning techniques in medical image analysis have shown promising results, demonstrating that artificial intelligence-based solutions can accelerate the diagnosis of COVID-19 and lower the burden on healthcare professionals. However, the lack of a huge amount of well-annotated data poses a challenge in building effective deep neural networks in the case of novel diseases and pandemics. Motivated by this, we present COVID-Net USPro, an explainable few-shot deep prototypical network, that monitors and detects COVID-19 positive cases with high precision and recall from minimal ultrasound images. COVID-Net USPro achieves 99.65% overall accuracy, 99.7% recall and 99.67% precision for COVID-19 positive cases when trained with only 5 shots. The analytic pipeline and results were verified by our contributing clinician with extensive experience in POCUS interpretation, ensuring that the network makes decisions based on actual patterns.
Light guide plates are essential optical components widely used in a diverse range of applications ranging from medical lighting fixtures to back-lit TV displays. In this work, we introduce a fully-integrated, high-throughput, high-performance deep learning-driven workflow for light guide plate surface visual quality inspection (VQI) tailored for real-world manufacturing environments. To enable automated VQI on the edge computing within the fully-integrated VQI system, a highly compact deep anti-aliased attention condenser neural network (which we name LightDefectNet) tailored specifically for light guide plate surface defect detection in resource-constrained scenarios was created via machine-driven design exploration with computational and "best-practices" constraints as well as L_1 paired classification discrepancy loss. Experiments show that LightDetectNet achieves a detection accuracy of ~98.2% on the LGPSDD benchmark while having just 770K parameters (~33X and ~6.9X lower than ResNet-50 and EfficientNet-B0, respectively) and ~93M FLOPs (~88X and ~8.4X lower than ResNet-50 and EfficientNet-B0, respectively) and ~8.8X faster inference speed than EfficientNet-B0 on an embedded ARM processor. As such, the proposed deep learning-driven workflow, integrated with the aforementioned LightDefectNet neural network, is highly suited for high-throughput, high-performance light plate surface VQI within real-world manufacturing environments.
Creating high-performance generalizable deep neural networks for phytoplankton monitoring requires utilizing large-scale data coming from diverse global water sources. A major challenge to training such networks lies in data privacy, where data collected at different facilities are often restricted from being transferred to a centralized location. A promising approach to overcome this challenge is federated learning, where training is done at site level on local data, and only the model parameters are exchanged over the network to generate a global model. In this study, we explore the feasibility of leveraging federated learning for privacy-preserving training of deep neural networks for phytoplankton classification. More specifically, we simulate two different federated learning frameworks, federated learning (FL) and mutually exclusive FL (ME-FL), and compare their performance to a traditional centralized learning (CL) framework. Experimental results from this study demonstrate the feasibility and potential of federated learning for phytoplankton monitoring.
Computer vision and machine learning are playing an increasingly important role in computer-assisted diagnosis; however, the application of deep learning to medical imaging has challenges in data availability and data imbalance, and it is especially important that models for medical imaging are built to be trustworthy. Therefore, we propose TRUDLMIA, a trustworthy deep learning framework for medical image analysis, which adopts a modular design, leverages self-supervised pre-training, and utilizes a novel surrogate loss function. Experimental evaluations indicate that models generated from the framework are both trustworthy and high-performing. It is anticipated that the framework will support researchers and clinicians in advancing the use of deep learning for dealing with public health crises including COVID-19.
As the COVID-19 pandemic continues to put a significant burden on healthcare systems worldwide, there has been growing interest in finding inexpensive symptom pre-screening and recommendation methods to assist in efficiently using available medical resources such as PCR tests. In this study, we introduce the design of COVID-Net Assistant, an efficient virtual assistant designed to provide symptom prediction and recommendations for COVID-19 by analyzing users' cough recordings through deep convolutional neural networks. We explore a variety of highly customized, lightweight convolutional neural network architectures generated via machine-driven design exploration (which we refer to as COVID-Net Assistant neural networks) on the Covid19-Cough benchmark dataset. The Covid19-Cough dataset comprises 682 cough recordings from a COVID-19 positive cohort and 642 from a COVID-19 negative cohort. Among the 682 cough recordings labeled positive, 382 recordings were verified by PCR test. Our experimental results show promising, with the COVID-Net Assistant neural networks demonstrating robust predictive performance, achieving AUC scores of over 0.93, with the best score over 0.95 while being fast and efficient in inference. The COVID-Net Assistant models are made available in an open source manner through the COVID-Net open initiative and, while not a production-ready solution, we hope their availability acts as a good resource for clinical scientists, machine learning researchers, as well as citizen scientists to develop innovative solutions.
Model pruning can enable the deployment of neural networks in environments with resource constraints. While pruning may have a small effect on the overall performance of the model, it can exacerbate existing biases into the model such that subsets of samples see significantly degraded performance. In this paper, we introduce the performance weighted loss function, a simple modified cross-entropy loss function that can be used to limit the introduction of biases during pruning. Experiments using biased classifiers for facial classification and skin-lesion classification tasks demonstrate that the proposed method is a simple and effective tool that can enable existing pruning methods to be used in fairness sensitive contexts.
In electronics manufacturing, solder joint defects are a common problem affecting a variety of printed circuit board components. To identify and correct solder joint defects, the solder joints on a circuit board are typically inspected manually by trained human inspectors, which is a very time-consuming and error-prone process. To improve both inspection efficiency and accuracy, in this work we describe an explainable deep learning-based visual quality inspection system tailored for visual inspection of solder joints in electronics manufacturing environments. At the core of this system is an explainable solder joint defect identification system called SolderNet which we design and implement with trust and transparency in mind. While several challenges remain before the full system can be developed and deployed, this study presents important progress towards trustworthy visual inspection of solder joints in electronics manufacturing.