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Benchmarking Relief-Based Feature Selection Methods for Bioinformatics Data Mining

Apr 03, 2018
Ryan J. Urbanowicz, Randal S. Olson, Peter Schmitt, Melissa Meeker, Jason H. Moore

* Revised submission to JBI 

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Relief-Based Feature Selection: Introduction and Review

Apr 02, 2018
Ryan J. Urbanowicz, Melissa Meeker, William LaCava, Randal S. Olson, Jason H. Moore

* Submitted revisions for publication based on reviews by the Journal of Biomedical Informatics 

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Layered TPOT: Speeding up Tree-based Pipeline Optimization

Mar 12, 2018
Pieter Gijsbers, Joaquin Vanschoren, Randal S. Olson

* Update to include a reference to Zutty et al. after it was brought to our attention 

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Data-driven Advice for Applying Machine Learning to Bioinformatics Problems

Jan 07, 2018
Randal S. Olson, William La Cava, Zairah Mustahsan, Akshay Varik, Jason H. Moore

* 12 pages, 5 figures, 4 tables. To be published in the proceedings of PSB 2018. Randal S. Olson and William La Cava contributed equally as co-first authors 

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Considerations of automated machine learning in clinical metabolic profiling: Altered homocysteine plasma concentration associated with metformin exposure

Oct 09, 2017
Alena Orlenko, Jason H. Moore, Patryk Orzechowski, Randal S. Olson, Junmei Cairns, Pedro J. Caraballo, Richard M. Weinshilboum, Liewei Wang, Matthew K. Breitenstein

* Pacific Symposium on Biocomputing, 2018 (Vol. 23) 
* Manuscript - containing supplementary information - accepted (9/15/2017) for publication within Pacific Symposium on Biocomputing 2018 . Original supplementary information includes an additional 6 pages of content (18 pages total) and 8 figures (13 figures total) 

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Markov Brains: A Technical Introduction

Sep 17, 2017
Arend Hintze, Jeffrey A. Edlund, Randal S. Olson, David B. Knoester, Jory Schossau, Larissa Albantakis, Ali Tehrani-Saleh, Peter Kvam, Leigh Sheneman, Heather Goldsby, Clifford Bohm, Christoph Adami


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A System for Accessible Artificial Intelligence

Aug 10, 2017
Randal S. Olson, Moshe Sipper, William La Cava, Sharon Tartarone, Steven Vitale, Weixuan Fu, Patryk Orzechowski, Ryan J. Urbanowicz, John H. Holmes, Jason H. Moore

* 14 pages, 5 figures, submitted to Genetic Programming Theory and Practice 2017 workshop 

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PMLB: A Large Benchmark Suite for Machine Learning Evaluation and Comparison

Mar 01, 2017
Randal S. Olson, William La Cava, Patryk Orzechowski, Ryan J. Urbanowicz, Jason H. Moore

* 14 pages, 5 figures, submitted for review to JMLR 

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Toward the automated analysis of complex diseases in genome-wide association studies using genetic programming

Feb 06, 2017
Andrew Sohn, Randal S. Olson, Jason H. Moore

* 9 pages, 4 figures, submitted to GECCO 2017 conference and currently under review 

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Identifying and Harnessing the Building Blocks of Machine Learning Pipelines for Sensible Initialization of a Data Science Automation Tool

Jul 29, 2016
Randal S. Olson, Jason H. Moore

* 13 pages, 5 figures, preprint of chapter to appear in GPTP 2016 book 

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Evolution of active categorical image classification via saccadic eye movement

Jun 16, 2016
Randal S. Olson, Jason H. Moore, Christoph Adami

* Lecture Notes in Computer Science 9921 (2016) 581-590 
* 10 pages, 5 figures, to appear in PPSN 2016 conference proceedings 

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Evaluation of a Tree-based Pipeline Optimization Tool for Automating Data Science

Mar 20, 2016
Randal S. Olson, Nathan Bartley, Ryan J. Urbanowicz, Jason H. Moore

* 8 pages, 5 figures, preprint to appear in GECCO 2016, edits not yet made from reviewer comments 

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Exploring the coevolution of predator and prey morphology and behavior

Feb 29, 2016
Randal S. Olson, Arend Hintze, Fred C. Dyer, Jason H. Moore, Christoph Adami

* Proceedings Artificial Life 15 (C. Gershenson, T. Froese, J.M. Sisqueiros, W. Aguilar, E.J. Izquierdo, H. Sayama, eds.) MIT Press (Cambridge, MA, 2016), pp. 250-258 
* 8 pages, 8 figures, submitted to Artificial Life 2016 conference 

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Automating biomedical data science through tree-based pipeline optimization

Jan 28, 2016
Randal S. Olson, Ryan J. Urbanowicz, Peter C. Andrews, Nicole A. Lavender, La Creis Kidd, Jason H. Moore

* 16 pages, 5 figures, to appear in EvoBIO 2016 proceedings 

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Evolution of swarming behavior is shaped by how predators attack

Nov 24, 2015
Randal S. Olson, David B. Knoester, Christoph Adami

* 25 pages, 11 figures, 5 tables, including 2 Supplementary Figures. Version to appear in "Artificial Life" 

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Exploring the evolution of a trade-off between vigilance and foraging in group-living organisms

Aug 08, 2014
Randal S. Olson, Patrick B. Haley, Fred C. Dyer, Christoph Adami

* Royal Society open science 2 (2015) 150135 
* 26 pages (double-spaced, single column), 6 figures, 2 SI figures 

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Risk aversion as an evolutionary adaptation

Oct 23, 2013
Arend Hintze, Randal S. Olson, Christoph Adami, Ralph Hertwig

* Scientific Reports 5 (2015) 8242 
* 18 pages, 7 figures 

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Predator confusion is sufficient to evolve swarming behavior

Apr 03, 2013
Randal S. Olson, Arend Hintze, Fred C. Dyer, David B. Knoester, Christoph Adami

* J. Royal Society Interface 10 (2013) 2010305 
* 11 pages, 6 figures. Supplementary information (including video files S1 and S5) in ancillary material. Videos S2-S4 are available from the authors upon request 

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