Get our free extension to see links to code for papers anywhere online!

Chrome logo Add to Chrome

Firefox logo Add to Firefox

Picture for Kirk Roberts

Searching for Scientific Evidence in a Pandemic: An Overview of TREC-COVID


Apr 19, 2021
Kirk Roberts, Tasmeer Alam, Steven Bedrick, Dina Demner-Fushman, Kyle Lo, Ian Soboroff, Ellen Voorhees, Lucy Lu Wang, William R Hersh


  Access Paper or Ask Questions

Hierarchical Transformer Networks for Longitudinal Clinical Document Classification


Apr 17, 2021
Yuqi Si, Kirk Roberts

* Work in progress 

  Access Paper or Ask Questions

Generalized and Transferable Patient Language Representation for Phenotyping with Limited Data


Feb 24, 2021
Yuqi Si, Elmer V Bernstam, Kirk Roberts

* Journal of Biomedical Informatics (in press) 

  Access Paper or Ask Questions

Leveraging Spatial Information in Radiology Reports for Ischemic Stroke Phenotyping


Oct 10, 2020
Surabhi Datta, Shekhar Khanpara, Roy F. Riascos, Kirk Roberts


  Access Paper or Ask Questions

Deep Representation Learning of Patient Data from Electronic Health Records (EHR): A Systematic Review


Oct 06, 2020
Yuqi Si, Jingcheng Du, Zhao Li, Xiaoqian Jiang, Timothy Miller, Fei Wang, W. Jim Zheng, Kirk Roberts


  Access Paper or Ask Questions

Extracting Concepts for Precision Oncology from the Biomedical Literature


Sep 30, 2020
Nicholas Greenspan, Yuqi Si, Kirk Roberts


  Access Paper or Ask Questions

RadLex Normalization in Radiology Reports


Sep 10, 2020
Surabhi Datta, Jordan Godfrey-Stovall, Kirk Roberts

* Accepted at the AMIA Annual Symposium 2020 

  Access Paper or Ask Questions

Patient Cohort Retrieval using Transformer Language Models


Sep 10, 2020
Sarvesh Soni, Kirk Roberts

* Accepted at the AMIA Annual Symposium 2020 

  Access Paper or Ask Questions

Understanding Spatial Language in Radiology: Representation Framework, Annotation, and Spatial Relation Extraction from Chest X-ray Reports using Deep Learning


Aug 13, 2019
Surabhi Datta, Yuqi Si, Laritza Rodriguez, Sonya E Shooshan, Dina Demner-Fushman, Kirk Roberts


  Access Paper or Ask Questions

A frame semantic overview of NLP-based information extraction for cancer-related EHR notes


Apr 02, 2019
Surabhi Datta, Elmer V Bernstam, Kirk Roberts

* 2 figures, 4 tables 

  Access Paper or Ask Questions

Enhancing Clinical Concept Extraction with Contextual Embedding


Feb 22, 2019
Yuqi Si, Jingqi Wang, Hua Xu, Kirk Roberts


  Access Paper or Ask Questions

Learning to Read Chest X-Rays: Recurrent Neural Cascade Model for Automated Image Annotation


Mar 28, 2016
Hoo-Chang Shin, Kirk Roberts, Le Lu, Dina Demner-Fushman, Jianhua Yao, Ronald M Summers


  Access Paper or Ask Questions