PIPsUS: Self-Supervised Dense Point Tracking in Ultrasound

Finding point-level correspondences is a fundamental problem in ultrasound (US), since it can enable US landmark tracking for intraoperative image guidance in different surgeries, including head and neck. Most existing US tracking methods, e.g., those based on optical flow or feature matching, were initially designed for RGB images before being applied to US. Therefore domain shift can impact their performance. Training could be supervised by ground-truth correspondences, but these are expensive to acquire in US. To solve these problems, we propose a self-supervised pixel-level tracking model called PIPsUS. Our model can track an arbitrary number of points in one forward pass and exploits temporal information by considering multiple, instead of just consecutive, frames. We developed a new self-supervised training strategy that utilizes a long-term point-tracking model trained for RGB images as a teacher to guide the model to learn realistic motions and use data augmentation to enforce tracking from US appearance. We evaluate our method on neck and oral US and echocardiography, showing higher point tracking accuracy when compared with fast normalized cross-correlation and tuned optical flow. Code will be available once the paper is accepted.

Transcervical Ultrasound Image Guidance System for Transoral Robotic Surgery

Purpose: Trans-oral robotic surgery (TORS) using the da Vinci surgical robot is a new minimally-invasive surgery method to treat oropharyngeal tumors, but it is a challenging operation. Augmented reality (AR) based on intra-operative ultrasound (US) has the potential to enhance the visualization of the anatomy and cancerous tumors to provide additional tools for decision-making in surgery. Methods: We propose and carry out preliminary evaluations of a US-guided AR system for TORS, with the transducer placed on the neck for a transcervical view. Firstly, we perform a novel MRI-transcervical 3D US registration study. Secondly, we develop a US-robot calibration method with an optical tracker and an AR system to display the anatomy mesh model in the real-time endoscope images inside the surgeon console. Results: Our AR system reaches a mean projection error of 26.81 and 27.85 pixels for the projection from the US to stereo cameras in a water bath experiment. The average target registration error for MRI to 3D US is 8.90 mm for the 3D US transducer and 5.85 mm for freehand 3D US, and the average distance between the vessel centerlines is 2.32 mm. Conclusion: We demonstrate the first proof-of-concept transcervical US-guided AR system for TORS and the feasibility of trans-cervical 3D US-MRI registration. Our results show that trans-cervical 3D US is a promising technique for TORS image guidance.

Variational Shape Completion for Virtual Planning of Jaw Reconstructive Surgery

The premorbid geometry of the mandible is of significant relevance in jaw reconstructive surgeries and occasionally unknown to the surgical team. In this paper, an optimization framework is introduced to train deep models for completion (reconstruction) of the missing segments of the bone based on the remaining healthy structure. To leverage the contextual information of the surroundings of the dissected region, the voxel-weighted Dice loss is introduced. To address the non-deterministic nature of the shape completion problem, we leverage a weighted multi-target probabilistic solution which is an extension to the conditional variational autoencoder (CVAE). This approach considers multiple targets as acceptable reconstructions, each weighted according to their conformity with the original shape. We quantify the performance gain of the proposed method against similar algorithms, including CVAE, where we report statistically significant improvements in both deterministic and probabilistic paradigms. The probabilistic model is also evaluated on its ability to generate anatomically relevant variations for the missing bone. As a unique aspect of this work, the model is tested on real surgical cases where the clinical relevancy of its reconstructions and their compliance with surgeon's virtual plan are demonstrated as necessary steps towards clinical adoption.

Variational Mandible Shape Completion for Virtual Surgical Planning

The premorbid geometry of the mandible is of significant relevance in jaw reconstructive surgeries and occasionally unknown to the surgical team. In this paper, an optimization framework is introduced to train deep models for completion (reconstruction) of the missing segments of the bone based on the remaining healthy structure. To leverage the contextual information of the surroundings of the dissected region, the voxel-weighted Dice loss is introduced. To address the non-deterministic nature of the shape completion problem, we leverage a weighted multi-target probabilistic solution which is an extension to the conditional variational autoencoder (CVAE). This approach considers multiple targets as acceptable reconstructions, each weighted according to their conformity with the original shape. We quantify the performance gain of the proposed method against similar algorithms, including CVAE, where we report statistically significant improvements in both deterministic and probabilistic paradigms. The probabilistic model is also evaluated on its ability to generate anatomically relevant variations for the missing bone. As a unique aspect of this work, the model is tested on real surgical cases where the clinical relevancy of its reconstructions and their compliance with surgeon's virtual plan are demonstrated as necessary steps towards clinical adoption.