SMedBERT: A Knowledge-Enhanced Pre-trained Language Model with Structured Semantics for Medical Text Mining

Recently, the performance of Pre-trained Language Models (PLMs) has been significantly improved by injecting knowledge facts to enhance their abilities of language understanding. For medical domains, the background knowledge sources are especially useful, due to the massive medical terms and their complicated relations are difficult to understand in text. In this work, we introduce SMedBERT, a medical PLM trained on large-scale medical corpora, incorporating deep structured semantic knowledge from neighbors of linked-entity.In SMedBERT, the mention-neighbor hybrid attention is proposed to learn heterogeneous-entity information, which infuses the semantic representations of entity types into the homogeneous neighboring entity structure. Apart from knowledge integration as external features, we propose to employ the neighbors of linked-entities in the knowledge graph as additional global contexts of text mentions, allowing them to communicate via shared neighbors, thus enrich their semantic representations. Experiments demonstrate that SMedBERT significantly outperforms strong baselines in various knowledge-intensive Chinese medical tasks. It also improves the performance of other tasks such as question answering, question matching and natural language inference.

Knowledge-Empowered Representation Learning for Chinese Medical Reading Comprehension: Task, Model and Resources

Machine Reading Comprehension (MRC) aims to extract answers to questions given a passage. It has been widely studied recently, especially in open domains. However, few efforts have been made on closed-domain MRC, mainly due to the lack of large-scale training data. In this paper, we introduce a multi-target MRC task for the medical domain, whose goal is to predict answers to medical questions and the corresponding support sentences from medical information sources simultaneously, in order to ensure the high reliability of medical knowledge serving. A high-quality dataset is manually constructed for the purpose, named Multi-task Chinese Medical MRC dataset (CMedMRC), with detailed analysis conducted. We further propose the Chinese medical BERT model for the task (CMedBERT), which fuses medical knowledge into pre-trained language models by the dynamic fusion mechanism of heterogeneous features and the multi-task learning strategy. Experiments show that CMedBERT consistently outperforms strong baselines by fusing context-aware and knowledge-aware token representations.