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Robust Segmentation Models using an Uncertainty Slice Sampling Based Annotation Workflow

Sep 30, 2021
Grzegorz Chlebus, Andrea Schenk, Horst K. Hahn, Bram van Ginneken, Hans Meine

* This work has been submitted to the IEEE for possible publication. Copyright may be transferred without notice, after which this version may no longer be accessible 

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Anisotropic 3D Multi-Stream CNN for Accurate Prostate Segmentation from Multi-Planar MRI

Sep 23, 2020
Anneke Meyer, Grzegorz Chlebus, Marko Rak, Daniel Schindele, Martin Schostak, Bram van Ginneken, Andrea Schenk, Hans Meine, Horst K. Hahn, Andreas Schreiber, Christian Hansen

* Submitted to Elsevier Computer Methods and Programs in Biomedicine. Anneke Meyer and Grzegorz Chlebus contributed equally to this work. Sourcecode and data available at 

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The Liver Tumor Segmentation Benchmark (LiTS)

Jan 13, 2019
Patrick Bilic, Patrick Ferdinand Christ, Eugene Vorontsov, Grzegorz Chlebus, Hao Chen, Qi Dou, Chi-Wing Fu, Xiao Han, Pheng-Ann Heng, Jürgen Hesser, Samuel Kadoury, Tomasz Konopczynski, Miao Le, Chunming Li, Xiaomeng Li, Jana Lipkovà, John Lowengrub, Hans Meine, Jan Hendrik Moltz, Chris Pal, Marie Piraud, Xiaojuan Qi, Jin Qi, Markus Rempfler, Karsten Roth, Andrea Schenk, Anjany Sekuboyina, Eugene Vorontsov, Ping Zhou, Christian Hülsemeyer, Marcel Beetz, Florian Ettlinger, Felix Gruen, Georgios Kaissis, Fabian Lohöfer, Rickmer Braren, Julian Holch, Felix Hofmann, Wieland Sommer, Volker Heinemann, Colin Jacobs, Gabriel Efrain Humpire Mamani, Bram van Ginneken, Gabriel Chartrand, An Tang, Michal Drozdzal, Avi Ben-Cohen, Eyal Klang, Marianne M. Amitai, Eli Konen, Hayit Greenspan, Johan Moreau, Alexandre Hostettler, Luc Soler, Refael Vivanti, Adi Szeskin, Naama Lev-Cohain, Jacob Sosna, Leo Joskowicz, Bjoern H. Menze

* conference 

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Comparison of U-net-based Convolutional Neural Networks for Liver Segmentation in CT

Oct 09, 2018
Hans Meine, Grzegorz Chlebus, Mohsen Ghafoorian, Itaru Endo, Andrea Schenk

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Neural Network-Based Automatic Liver Tumor Segmentation With Random Forest-Based Candidate Filtering

Jun 27, 2017
Grzegorz Chlebus, Hans Meine, Jan Hendrik Moltz, Andrea Schenk

* Submitted to the ISBI 2017 LiTS Challenge 

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