Multi-scale Embedded CNN for Music Tagging (MsE-CNN)

Convolutional neural networks (CNN) recently gained notable attraction in a variety of machine learning tasks: including music classification and style tagging. In this work, we propose implementing intermediate connections to the CNN architecture to facilitate the transfer of multi-scale/level knowledge between different layers. Our novel model for music tagging shows significant improvement in comparison to the proposed approaches in the literature, due to its ability to carry low-level timbral features to the last layer.

What does AI see? Deep segmentation networks discover biomarkers for lung cancer survival

Non-small-cell lung cancer (NSCLC) represents approximately 80-85% of lung cancer diagnoses and is the leading cause of cancer-related death worldwide. Recent studies indicate that image-based radiomics features from positron emission tomography-computed tomography (PET/CT) images have predictive power on NSCLC outcomes. To this end, easily calculated functional features such as the maximum and the mean of standard uptake value (SUV) and total lesion glycolysis (TLG) are most commonly used for NSCLC prognostication, but their prognostic value remains controversial. Meanwhile, convolutional neural networks (CNN) are rapidly emerging as a new premise for cancer image analysis, with significantly enhanced predictive power compared to other hand-crafted radiomics features. Here we show that CNN trained to perform the tumor segmentation task, with no other information than physician contours, identify a rich set of survival-related image features with remarkable prognostic value. In a retrospective study on 96 NSCLC patients before stereotactic-body radiotherapy (SBRT), we found that the CNN segmentation algorithm (U-Net) trained for tumor segmentation in PET/CT images, contained features having strong correlation with 2- and 5-year overall and disease-specific survivals. The U-net algorithm has not seen any other clinical information (e.g. survival, age, smoking history) than the images and the corresponding tumor contours provided by physicians. Furthermore, through visualization of the U-Net, we also found convincing evidence that the regions of progression appear to match with the regions where the U-Net features identified patterns that predicted higher likelihood of death. We anticipate our findings will be a starting point for more sophisticated non-intrusive patient specific cancer prognosis determination.

ZerNet: Convolutional Neural Networks on Arbitrary Surfaces via Zernike Local Tangent Space Estimation

The research community has observed a massive success of convolutional neural networks (CNN) in visual recognition tasks. Such powerful CNNs, however, do not generalize well to arbitrary-shaped mainfold domains. Thus, still many visual recognition problems defined on arbitrary manifolds cannot benefit much from the success of CNNs, if at all. Technical difficulties hindering generalization of CNNs are rooted in the lack of a canonical grid-like representation, the notion of consistent orientation, and a compatible local topology across the domain. Unfortunately, except for a few pioneering works, only very little has been studied in this regard. To this end, in this paper, we propose a novel mathematical formulation to extend CNNs onto two-dimensional (2D) manifold domains. More specifically, we approximate a tensor field defined over a manifold using orthogonal basis functions, called Zernike polynomials, on local tangent spaces. We prove that the convolution of two functions can be represented as a simple dot product between Zernike polynomial coefficients. We also prove that a rotation of a convolution kernel equates to a 2 by 2 rotation matrix applied to Zernike polynomial coefficients, which can be critical in manifold domains. As such, the key contribution of this work resides in a concise but rigorous mathematical generalization of the CNN building blocks. Furthermore, comparative to the other state-of-the-art methods, our method demonstrates substantially better performance on both classification and regression tasks.

Deep Spectral Descriptors: Learning the point-wise correspondence metric via Siamese deep neural networks

A robust and informative local shape descriptor plays an important role in mesh registration. In this regard, spectral descriptors that are based on the spectrum of the Laplace-Beltrami operator have gained a spotlight among the researchers for the last decade due to their desirable properties, such as isometry invariance. Despite such, however, spectral descriptors often fail to give a correct similarity measure for non-isometric cases where the metric distortion between the models is large. Hence, they are in general not suitable for the registration problems, except for the special cases when the models are near-isometry. In this paper, we investigate a way to develop shape descriptors for non-isometric registration tasks by embedding the spectral shape descriptors into a different metric space where the Euclidean distance between the elements directly indicates the geometric dissimilarity. We design and train a Siamese deep neural network to find such an embedding, where the embedded descriptors are promoted to rearrange based on the geometric similarity. We found our approach can significantly enhance the performance of the conventional spectral descriptors for the non-isometric registration tasks, and outperforms recent state-of-the-art method reported in literature.

Wall Stress Estimation of Cerebral Aneurysm based on Zernike Convolutional Neural Networks

Convolutional neural networks (ConvNets) have demonstrated an exceptional capacity to discern visual patterns from digital images and signals. Unfortunately, such powerful ConvNets do not generalize well to arbitrary-shaped manifolds, where data representation does not fit into a tensor-like grid. Hence, many fields of science and engineering, where data points possess some manifold structure, cannot enjoy the full benefits of the recent advances in ConvNets. The aneurysm wall stress estimation problem introduced in this paper is one of many such problems. The problem is well-known to be of a paramount clinical importance, but yet, traditional ConvNets cannot be applied due to the manifold structure of the data, neither does the state-of-the-art geometric ConvNets perform well. Motivated by this, we propose a new geometric ConvNet method named ZerNet, which builds upon our novel mathematical generalization of convolution and pooling operations on manifolds. Our study shows that the ZerNet outperforms the other state-of-the-art geometric ConvNets in terms of accuracy.