Abstract:Video Capsule Endoscopy (VCE) is a promising method for improving the medical examination of the small intestine in the gastrointestinal tract. A key challenge is their limited size, resulting in a short battery lifetime which conflicts with high energy consumption for image capturing and transmission to an on-body device. Thus, we propose an image compression pipeline that substantially reduces the transmitted data while preserving diagnostic image quality. Furthermore, we exploit characteristics of the compression process to identify frames with low diagnostic value mainly caused by bubbles, without requiring additional image analysis. For low-visibility frames, a dynamic bubble-aware frame rate adaptation strategy reduces image acquisition and transmission during these phases while preserving sensitivity to potential anomalies. The proposed compression and frame rate adaptation are evaluated on a RISC-V platform using the Kvasir-Capsule and Galar datasets. The compression method achieves a compression ratio of 5.748 (82.6%) at a peak signal-to-noise ratio of 40.3 dB, indicating negligible loss of visual quality. The compression accomplished a mean energy reduction of the whole system by 20.58%. Additionally, the proposed bubble-aware frame rate adaptation reduced the energy consumption by up to 40%. These results demonstrate the potential of our method to increase the applicability of VCE.
Abstract:The classification performance of deep neural networks relies strongly on access to large, accurately annotated datasets. In medical imaging, however, obtaining such datasets is particularly challenging since annotations must be provided by specialized physicians, which severely limits the pool of annotators. Furthermore, class boundaries can often be ambiguous or difficult to define which further complicates machine learning-based classification. In this paper, we want to address this problem and introduce a framework for mislabel detection in medical datasets. This is validated on the two largest, publicly available datasets for Video Capsule Endoscopy, an important imaging procedure for examining the gastrointestinal tract based on a video stream of lowresolution images. In addition, potentially mislabeled samples identified by our pipeline were reviewed and re-annotated by three experienced gastroenterologists. Our results show that the proposed framework successfully detects incorrectly labeled data and results in an improved anomaly detection performance after cleaning the datasets compared to current baselines.
Abstract:As machine learning applications continue to evolve, the demand for efficient hardware accelerators, specifically tailored for deep neural networks (DNNs), becomes increasingly vital. In this paper, we propose a configurable memory hierarchy framework tailored for per layer adaptive memory access patterns of DNNs. The hierarchy requests data on-demand from the off-chip memory to provide it to the accelerator's compute units. The objective is to strike an optimized balance between minimizing the required memory capacity and maintaining high accelerator performance. The framework is characterized by its configurability, allowing the creation of a tailored memory hierarchy with up to five levels. Furthermore, the framework incorporates an optional shift register as final level to increase the flexibility of the memory management process. A comprehensive loop-nest analysis of DNN layers shows that the framework can efficiently execute the access patterns of most loop unrolls. Synthesis results and a case study of the DNN accelerator UltraTrail indicate a possible reduction in chip area of up to 62.2% as smaller memory modules can be used. At the same time, the performance loss can be minimized to 2.4%.