Document Set Expansion with Positive-Unlabelled Learning Using Intractable Density Estimation

The Document Set Expansion (DSE) task involves identifying relevant documents from large collections based on a limited set of example documents. Previous research has highlighted Positive and Unlabeled (PU) learning as a promising approach for this task. However, most PU methods rely on the unrealistic assumption of knowing the class prior for positive samples in the collection. To address this limitation, this paper introduces a novel PU learning framework that utilizes intractable density estimation models. Experiments conducted on PubMed and Covid datasets in a transductive setting showcase the effectiveness of the proposed method for DSE. Code is available from https://github.com/Beautifuldog01/Document-set-expansion-puDE.

Document Set Expansion with Positive-Unlabeled Learning: A Density Estimation-based Approach

Document set expansion aims to identify relevant documents from a large collection based on a small set of documents that are on a fine-grained topic. Previous work shows that PU learning is a promising method for this task. However, some serious issues remain unresolved, i.e. typical challenges that PU methods suffer such as unknown class prior and imbalanced data, and the need for transductive experimental settings. In this paper, we propose a novel PU learning framework based on density estimation, called puDE, that can handle the above issues. The advantage of puDE is that it neither constrained to the SCAR assumption and nor require any class prior knowledge. We demonstrate the effectiveness of the proposed method using a series of real-world datasets and conclude that our method is a better alternative for the DSE task.

Combining Counting Processes and Classification Improves a Stopping Rule for Technology Assisted Review

Technology Assisted Review (TAR) stopping rules aim to reduce the cost of manually assessing documents for relevance by minimising the number of documents that need to be examined to ensure a desired level of recall. This paper extends an effective stopping rule using information derived from a text classifier that can be trained without the need for any additional annotation. Experiments on multiple data sets (CLEF e-Health, TREC Total Recall, TREC Legal and RCV1) showed that the proposed approach consistently improves performance and outperforms several alternative methods.

Stopping Methods for Technology Assisted Reviews based on Point Processes

Technology Assisted Review (TAR), which aims to reduce the effort required to screen collections of documents for relevance, is used to develop systematic reviews of medical evidence and identify documents that must be disclosed in response to legal proceedings. Stopping methods are algorithms which determine when to stop screening documents during the TAR process, helping to ensure that workload is minimised while still achieving a high level of recall. This paper proposes a novel stopping method based on point processes, which are statistical models that can be used to represent the occurrence of random events. The approach uses rate functions to model the occurrence of relevant documents in the ranking and compares four candidates, including one that has not previously been used for this purpose (hyperbolic). Evaluation is carried out using standard datasets (CLEF e-Health, TREC Total Recall, TREC Legal), and this work is the first to explore stopping method robustness by reporting performance on a range of rankings of varying effectiveness. Results show that the proposed method achieves the desired level of recall without requiring an excessive number of documents to be examined in the majority of cases and also compares well against multiple alternative approaches.

Scalable Label-efficient Footpath Network Generation Using Remote Sensing Data and Self-supervised Learning

Footpath mapping, modeling, and analysis can provide important geospatial insights to many fields of study, including transport, health, environment and urban planning. The availability of robust Geographic Information System (GIS) layers can benefit the management of infrastructure inventories, especially at local government level with urban planners responsible for the deployment and maintenance of such infrastructure. However, many cities still lack real-time information on the location, connectivity, and width of footpaths, and/or employ costly and manual survey means to gather this information. This work designs and implements an automatic pipeline for generating footpath networks based on remote sensing images using machine learning models. The annotation of segmentation tasks, especially labeling remote sensing images with specialized requirements, is very expensive, so we aim to introduce a pipeline requiring less labeled data. Considering supervised methods require large amounts of training data, we use a self-supervised method for feature representation learning to reduce annotation requirements. Then the pre-trained model is used as the encoder of the U-Net for footpath segmentation. Based on the generated masks, the footpath polygons are extracted and converted to footpath networks which can be loaded and visualized by geographic information systems conveniently. Validation results indicate considerable consistency when compared to manually collected GIS layers. The footpath network generation pipeline proposed in this work is low-cost and extensible, and it can be applied where remote sensing images are available. Github: https://github.com/WennyXY/FootpathSeg.

Bio-SIEVE: Exploring Instruction Tuning Large Language Models for Systematic Review Automation

Medical systematic reviews can be very costly and resource intensive. We explore how Large Language Models (LLMs) can support and be trained to perform literature screening when provided with a detailed set of selection criteria. Specifically, we instruction tune LLaMA and Guanaco models to perform abstract screening for medical systematic reviews. Our best model, Bio-SIEVE, outperforms both ChatGPT and trained traditional approaches, and generalises better across medical domains. However, there remains the challenge of adapting the model to safety-first scenarios. We also explore the impact of multi-task training with Bio-SIEVE-Multi, including tasks such as PICO extraction and exclusion reasoning, but find that it is unable to match single-task Bio-SIEVE's performance. We see Bio-SIEVE as an important step towards specialising LLMs for the biomedical systematic review process and explore its future developmental opportunities. We release our models, code and a list of DOIs to reconstruct our dataset for reproducibility.

On the Security Vulnerabilities of Text-to-SQL Models

Recent studies show that, despite being effective on numerous tasks, text processing algorithms may be vulnerable to deliberate attacks. However, the question of whether such weaknesses can directly lead to security threats is still under-explored. To bridge this gap, we conducted vulnerability tests on Text-to-SQL, a technique that builds natural language interfaces for databases. Empirically, we showed that the Text-to-SQL modules of two commercial black boxes (Baidu-UNIT and Codex-powered Ai2sql) can be manipulated to produce malicious code, potentially leading to data breaches and Denial of Service. This is the first demonstration of the danger of NLP models being exploited as attack vectors in the wild. Moreover, experiments involving four open-source frameworks verified that simple backdoor attacks can achieve a 100% success rate on Text-to-SQL systems with almost no prediction performance impact. By reporting these findings and suggesting practical defences, we call for immediate attention from the NLP community to the identification and remediation of software security issues.

Urban feature analysis from aerial remote sensing imagery using self-supervised and semi-supervised computer vision

Analysis of overhead imagery using computer vision is a problem that has received considerable attention in academic literature. Most techniques that operate in this space are both highly specialised and require expensive manual annotation of large datasets. These problems are addressed here through the development of a more generic framework, incorporating advances in representation learning which allows for more flexibility in analysing new categories of imagery with limited labeled data. First, a robust representation of an unlabeled aerial imagery dataset was created based on the momentum contrast mechanism. This was subsequently specialised for different tasks by building accurate classifiers with as few as 200 labeled images. The successful low-level detection of urban infrastructure evolution over a 10-year period from 60 million unlabeled images, exemplifies the substantial potential of our approach to advance quantitative urban research.

Self-Supervision, Remote Sensing and Abstraction: Representation Learning Across 3 Million Locations

Self-supervision based deep learning classification approaches have received considerable attention in academic literature. However, the performance of such methods on remote sensing imagery domains remains under-explored. In this work, we explore contrastive representation learning methods on the task of imagery-based city classification, an important problem in urban computing. We use satellite and map imagery across 2 domains, 3 million locations and more than 1500 cities. We show that self-supervised methods can build a generalizable representation from as few as 200 cities, with representations achieving over 95\% accuracy in unseen cities with minimal additional training. We also find that the performance discrepancy of such methods, when compared to supervised methods, induced by the domain discrepancy between natural imagery and abstract imagery is significant for remote sensing imagery. We compare all analysis against existing supervised models from academic literature and open-source our models for broader usage and further criticism.

Highly Efficient Knowledge Graph Embedding Learning with Orthogonal Procrustes Analysis

Knowledge Graph Embeddings (KGEs) have been intensively explored in recent years due to their promise for a wide range of applications. However, existing studies focus on improving the final model performance without acknowledging the computational cost of the proposed approaches, in terms of execution time and environmental impact. This paper proposes a simple yet effective KGE framework which can reduce the training time and carbon footprint by orders of magnitudes compared with state-of-the-art approaches, while producing competitive performance. We highlight three technical innovations: full batch learning via relational matrices, closed-form Orthogonal Procrustes Analysis for KGEs, and non-negative-sampling training. In addition, as the first KGE method whose entity embeddings also store full relation information, our trained models encode rich semantics and are highly interpretable. Comprehensive experiments and ablation studies involving 13 strong baselines and two standard datasets verify the effectiveness and efficiency of our algorithm.