Does Your VFM Speak Plant? The Botanical Grammar of Vision Foundation Models for Object Detection

Vision foundation models (VFMs) offer the promise of zero-shot object detection without task-specific training data, yet their performance in complex agricultural scenes remains highly sensitive to text prompt construction. We present a systematic prompt optimization framework evaluating four open-vocabulary detectors -- YOLO World, SAM3, Grounding DINO, and OWLv2 -- for cowpea flower and pod detection across synthetic and real field imagery. We decompose prompts into eight axes and conduct one-factor-at-a-time analysis followed by combinatorial optimization, revealing that models respond divergently to prompt structure: conditions that optimize one architecture can collapse another. Applying model-specific combinatorial prompts yields substantial gains over a naive species-name baseline, including +0.357 mAP@0.5 for YOLO World and +0.362 mAP@0.5 for OWLv2 on synthetic cowpea flower data. To evaluate cross-task generalization, we use an LLM to translate the discovered axis structure to a morphologically distinct target -- cowpea pods -- and compare against prompting using the discovered optimal structures from synthetic flower data. Crucially, prompt structures optimized exclusively on synthetic data transfer effectively to real-world fields: synthetic-pipeline prompts match or exceed those discovered on labeled real data for the majority of model-object combinations (flower: 0.374 vs. 0.353 for YOLO World; pod: 0.429 vs. 0.371 for SAM3). Our findings demonstrate that prompt engineering can substantially close the gap between zero-shot VFMs and supervised detectors without requiring manual annotation, and that optimal prompts are model-specific, non-obvious, and transferable across domains.

Using Vision Language Foundation Models to Generate Plant Simulation Configurations via In-Context Learning

This paper introduces a synthetic benchmark to evaluate the performance of vision language models (VLMs) in generating plant simulation configurations for digital twins. While functional-structural plant models (FSPMs) are useful tools for simulating biophysical processes in agricultural environments, their high complexity and low throughput create bottlenecks for deployment at scale. We propose a novel approach that leverages state-of-the-art open-source VLMs -- Gemma 3 and Qwen3-VL -- to directly generate simulation parameters in JSON format from drone-based remote sensing images. Using a synthetic cowpea plot dataset generated via the Helios 3D procedural plant generation library, we tested five in-context learning methods and evaluated the models across three categories: JSON integrity, geometric evaluations, and biophysical evaluations. Our results show that while VLMs can interpret structural metadata and estimate parameters like plant count and sun azimuth, they often exhibit performance degradation due to contextual bias or rely on dataset means when visual cues are insufficient. Validation on a real-world drone orthophoto dataset and an ablation study using a blind baseline further characterize the models' reasoning capabilities versus their reliance on contextual priors. To the best of our knowledge, this is the first study to utilize VLMs to generate structural JSON configurations for plant simulations, providing a scalable framework for reconstruction 3D plots for digital twin in agriculture.

AGILE: A Diffusion-Based Attention-Guided Image and Label Translation for Efficient Cross-Domain Plant Trait Identification

Semantically consistent cross-domain image translation facilitates the generation of training data by transferring labels across different domains, making it particularly useful for plant trait identification in agriculture. However, existing generative models struggle to maintain object-level accuracy when translating images between domains, especially when domain gaps are significant. In this work, we introduce AGILE (Attention-Guided Image and Label Translation for Efficient Cross-Domain Plant Trait Identification), a diffusion-based framework that leverages optimized text embeddings and attention guidance to semantically constrain image translation. AGILE utilizes pretrained diffusion models and publicly available agricultural datasets to improve the fidelity of translated images while preserving critical object semantics. Our approach optimizes text embeddings to strengthen the correspondence between source and target images and guides attention maps during the denoising process to control object placement. We evaluate AGILE on cross-domain plant datasets and demonstrate its effectiveness in generating semantically accurate translated images. Quantitative experiments show that AGILE enhances object detection performance in the target domain while maintaining realism and consistency. Compared to prior image translation methods, AGILE achieves superior semantic alignment, particularly in challenging cases where objects vary significantly or domain gaps are substantial.