Performance Analysis of Fractional Learning Algorithms

Fractional learning algorithms are trending in signal processing and adaptive filtering recently. However, it is unclear whether the proclaimed superiority over conventional algorithms is well-grounded or is a myth as their performance has never been extensively analyzed. In this article, a rigorous analysis of fractional variants of the least mean squares and steepest descent algorithms is performed. Some critical schematic kinks in fractional learning algorithms are identified. Their origins and consequences on the performance of the learning algorithms are discussed and swift ready-witted remedies are proposed. Apposite numerical experiments are conducted to discuss the convergence and efficiency of the fractional learning algorithms in stochastic environments.

DiffusionCLIP: Text-guided Image Manipulation Using Diffusion Models

Diffusion models are recent generative models that have shown great success in image generation with the state-of-the-art performance. However, only a few researches have been conducted for image manipulation with diffusion models. Here, we present a novel DiffusionCLIP which performs text-driven image manipulation with diffusion models using Contrastive Language-Image Pre-training (CLIP) loss. Our method has a performance comparable to that of the modern GAN-based image processing methods for in and out-of-domain image processing tasks, with the advantage of almost perfect inversion even without additional encoders or optimization. Furthermore, our method can be easily used for various novel applications, enabling image translation from an unseen domain to another unseen domain or stroke-conditioned image generation in an unseen domain, etc. Finally, we present a novel multiple attribute control with DiffusionCLIPby combining multiple fine-tuned diffusion models.

Deep Learning for Ultrasound Beamforming

Diagnostic imaging plays a critical role in healthcare, serving as a fundamental asset for timely diagnosis, disease staging and management as well as for treatment choice, planning, guidance, and follow-up. Among the diagnostic imaging options, ultrasound imaging is uniquely positioned, being a highly cost-effective modality that offers the clinician an unmatched and invaluable level of interaction, enabled by its real-time nature. Ultrasound probes are becoming increasingly compact and portable, with the market demand for low-cost pocket-sized and (in-body) miniaturized devices expanding. At the same time, there is a strong trend towards 3D imaging and the use of high-frame-rate imaging schemes; both accompanied by dramatically increasing data rates that pose a heavy burden on the probe-system communication and subsequent image reconstruction algorithms. With the demand for high-quality image reconstruction and signal extraction from less (e.g unfocused or parallel) transmissions that facilitate fast imaging, and a push towards compact probes, modern ultrasound imaging leans heavily on innovations in powerful digital receive channel processing. Beamforming, the process of mapping received ultrasound echoes to the spatial image domain, naturally lies at the heart of the ultrasound image formation chain. In this chapter on Deep Learning for Ultrasound Beamforming, we discuss why and when deep learning methods can play a compelling role in the digital beamforming pipeline, and then show how these data-driven systems can be leveraged for improved ultrasound image reconstruction.

Federated CycleGAN for Privacy-Preserving Image-to-Image Translation

Unsupervised image-to-image translation methods such as CycleGAN learn to convert images from one domain to another using unpaired training data sets from different domains. Unfortunately, these approaches still require centrally collected unpaired records, potentially violating privacy and security issues. Although the recent federated learning (FL) allows a neural network to be trained without data exchange, the basic assumption of the FL is that all clients have their own training data from a similar domain, which is different from our image-to-image translation scenario in which each client has images from its unique domain and the goal is to learn image translation between different domains without accessing the target domain data. To address this, here we propose a novel federated CycleGAN architecture that can learn image translation in an unsupervised manner while maintaining the data privacy. Specifically, our approach arises from a novel observation that CycleGAN loss can be decomposed into the sum of client specific local objectives that can be evaluated using only their data. This local objective decomposition allows multiple clients to participate in federated CycleGAN training without sacrificing performance. Furthermore, our method employs novel switchable generator and discriminator architecture using Adaptive Instance Normalization (AdaIN) that significantly reduces the band-width requirement of the federated learning. Our experimental results on various unsupervised image translation tasks show that our federated CycleGAN provides comparable performance compared to the non-federated counterpart.

Noise2Score: Tweedie's Approach to Self-Supervised Image Denoising without Clean Images

Recently, there has been extensive research interest in training deep networks to denoise images without clean reference. However, the representative approaches such as Noise2Noise, Noise2Void, Stein's unbiased risk estimator (SURE), etc. seem to differ from one another and it is difficult to find the coherent mathematical structure. To address this, here we present a novel approach, called Noise2Score, which reveals a missing link in order to unite these seemingly different approaches. Specifically, we show that image denoising problems without clean images can be addressed by finding the mode of the posterior distribution and that the Tweedie's formula offers an explicit solution through the score function (i.e. the gradient of log likelihood). Our method then uses the recent finding that the score function can be stably estimated from the noisy images using the amortized residual denoising autoencoder, the method of which is closely related to Noise2Noise or Nose2Void. Our Noise2Score approach is so universal that the same network training can be used to remove noises from images that are corrupted by any exponential family distributions and noise parameters. Using extensive experiments with Gaussian, Poisson, and Gamma noises, we show that Noise2Score significantly outperforms the state-of-the-art self-supervised denoising methods in the benchmark data set such as (C)BSD68, Set12, and Kodak, etc.

Learning Dynamic Graph Representation of Brain Connectome with Spatio-Temporal Attention

Functional connectivity (FC) between regions of the brain can be assessed by the degree of temporal correlation measured with functional neuroimaging modalities. Based on the fact that these connectivities build a network, graph-based approaches for analyzing the brain connectome have provided insights into the functions of the human brain. The development of graph neural networks (GNNs) capable of learning representation from graph structured data has led to increased interest in learning the graph representation of the brain connectome. Although recent attempts to apply GNN to the FC network have shown promising results, there is still a common limitation that they usually do not incorporate the dynamic characteristics of the FC network which fluctuates over time. In addition, a few studies that have attempted to use dynamic FC as an input for the GNN reported a reduction in performance compared to static FC methods, and did not provide temporal explainability. Here, we propose STAGIN, a method for learning dynamic graph representation of the brain connectome with spatio-temporal attention. Specifically, a temporal sequence of brain graphs is input to the STAGIN to obtain the dynamic graph representation, while novel READOUT functions and the Transformer encoder provide spatial and temporal explainability with attention, respectively. Experiments on the HCP-Rest and the HCP-Task datasets demonstrate exceptional performance of our proposed method. Analysis of the spatio-temporal attention also provide concurrent interpretation with the neuroscientific knowledge, which further validates our method. Code is available at https://github.com/egyptdj/stagin

Unsupervised Deep Learning Methods for Biological Image Reconstruction

Recently, deep learning approaches have become the main research frontier for biological image reconstruction problems thanks to their high performance, along with their ultra-fast reconstruction times. However, due to the difficulty of obtaining matched reference data for supervised learning, there has been increasing interest in unsupervised learning approaches that do not need paired reference data. In particular, self-supervised learning and generative models have been successfully used for various biological imaging applications. In this paper, we overview these approaches from a coherent perspective in the context of classical inverse problems, and discuss their applications to biological imaging.

Simultaneous super-resolution and motion artifact removal in diffusion-weighted MRI using unsupervised deep learning

Diffusion-weighted MRI is nowadays performed routinely due to its prognostic ability, yet the quality of the scans are often unsatisfactory which can subsequently hamper the clinical utility. To overcome the limitations, here we propose a fully unsupervised quality enhancement scheme, which boosts the resolution and removes the motion artifact simultaneously. This process is done by first training the network using optimal transport driven cycleGAN with stochastic degradation block which learns to remove aliasing artifacts and enhance the resolution, then using the trained network in the test stage by utilizing bootstrap subsampling and aggregation for motion artifact suppression. We further show that we can control the trade-off between the amount of artifact correction and resolution by controlling the bootstrap subsampling ratio at the inference stage. To the best of our knowledge, the proposed method is the first to tackle super-resolution and motion artifact correction simultaneously in the context of MRI using unsupervised learning. We demonstrate the efficiency of our method by applying it to both quantitative evaluation using simulation study, and to in vivo diffusion-weighted MR scans, which shows that our method is superior to the current state-of-the-art methods. The proposed method is flexible in that it can be applied to various quality enhancement schemes in other types of MR scans, and also directly to the quality enhancement of apparent diffusion coefficient maps.

Feature Disentanglement in generating three-dimensional structure from two-dimensional slice with sliceGAN

Deep generative models are known to be able to model arbitrary probability distributions. Among these, a recent deep generative model, dubbed sliceGAN, proposed a new way of using the generative adversarial network (GAN) to capture the micro-structural characteristics of a two-dimensional (2D) slice and generate three-dimensional (3D) volumes with similar properties. While 3D micrographs are largely beneficial in simulating diverse material behavior, they are often much harder to obtain than their 2D counterparts. Hence, sliceGAN opens up many interesting directions of research by learning the representative distribution from 2D slices, and transferring the learned knowledge to generate arbitrary 3D volumes. However, one limitation of sliceGAN is that latent space steering is not possible. Hence, we combine sliceGAN with AdaIN to endow the model with the ability to disentangle the features and control the synthesis.

Unifying domain adaptation and self-supervised learning for CXR segmentation via AdaIN-based knowledge distillation

As the segmentation labels are scarce, extensive researches have been conducted to train segmentation networks without labels or with only limited labels. In particular, domain adaptation, self-supervised learning, and teacher-student architecture have been introduced to distill knowledge from various tasks to improve the segmentation performance. However, these approaches appear different from each other, so it is not clear how these seemingly different approaches can be combined for better performance. Inspired by the recent StarGANv2 for multi-domain image translation, here we propose a novel segmentation framework via AdaIN-based knowledge distillation, where a single generator with AdaIN layers is trained along with the AdaIN code generator and style encoder so that the generator can perform both domain adaptation and segmentation. Specifically, our framework is designed to deal with difficult situations in chest X-ray (CXR) segmentation tasks where segmentation masks are only available for normal CXR data, but the trained model should be applied for both normal and abnormal CXR images. Since a single generator is used for abnormal to normal domain conversion and segmentation by simply changing the AdaIN codes, the generator can synergistically learn the common features to improve segmentation performance. Experimental results using CXR data confirm that the trained network can achieve the state-of-the art segmentation performance for both normal and abnormal CXR images.