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Mesh convolutional neural networks for wall shear stress estimation in 3D artery models


Sep 10, 2021
Julian Suk, Pim de Haan, Phillip Lippe, Christoph Brune, Jelmer M. Wolterink

* (MICCAI 2021) Workshop on Statistical Atlases and Computational Modelling of the Heart (STACOM) 

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Deep Learning from Dual-Energy Information for Whole-Heart Segmentation in Dual-Energy and Single-Energy Non-Contrast-Enhanced Cardiac CT


Aug 10, 2020
Steffen Bruns, Jelmer M. Wolterink, Richard A. P. Takx, Robbert W. van Hamersvelt, Dominika Suchá, Max A. Viergever, Tim Leiner, Ivana Išgum


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Deep Learning-Based Regression and Classification for Automatic Landmark Localization in Medical Images


Jul 10, 2020
Julia M. H. Noothout, Bob D. de Vos, Jelmer M. Wolterink, Elbrich M. Postma, Paul A. M. Smeets, Richard A. P. Takx, Tim Leiner, Max A. Viergever, Ivana Išgum

* 12 pages, accepted at IEEE transactions in Medical Imaging 

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Automatic Online Quality Control of Synthetic CTs


Nov 12, 2019
Louis D. van Harten, Jelmer M. Wolterink, Joost J. C. Verhoeff, Ivana Išgum

* SPIE Medical Imaging 2020 

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Exploiting Clinically Available Delineations for CNN-based Segmentation in Radiotherapy Treatment Planning


Nov 12, 2019
Louis D. van Harten, Jelmer M. Wolterink, Joost J. C. Verhoeff, Ivana Išgum

* SPIE Medical Imaging 2020 

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Combined analysis of coronary arteries and the left ventricular myocardium in cardiac CT angiography for detection of patients with functionally significant stenosis


Nov 10, 2019
Majd Zreik, Tim Leiner, Nadieh Khalili, Robbert W. van Hamersvelt, Jelmer M. Wolterink, Michiel Voskuil, Max A. Viergever, Ivana Išgum

* Submitted to IEEE Access. arXiv admin note: text overlap with arXiv:1906.04419 

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Graph Convolutional Networks for Coronary Artery Segmentation in Cardiac CT Angiography


Aug 14, 2019
Jelmer M. Wolterink, Tim Leiner, Ivana Išgum

* MICCAI 2019 Workshop on Graph Learning in Medical Image (GLMI) 

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Adversarial optimization for joint registration and segmentation in prostate CT radiotherapy


Jun 28, 2019
Mohamed S. Elmahdy, Jelmer M. Wolterink, Hessam Sokooti, Ivana Išgum, Marius Staring

* Accepted to MICCAI 2019, 13-17 Oct 2019, Shenzhen, China 

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Deep learning analysis of cardiac CT angiography for detection of coronary arteries with functionally significant stenosis


Jun 11, 2019
Majd Zreik, Robbert W. van Hamersvelt, Nadieh Khalili, Jelmer M. Wolterink, Michiel Voskuil, Max A. Viergever, Tim Leiner, Ivana Išgum

* This work has been submitted to the TMI IEEE for possible publication. Copyright may be transferred without notice, after which this version may no longer be accessible 

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Direct Automatic Coronary Calcium Scoring in Cardiac and Chest CT


Feb 12, 2019
Bob D. de Vos, Jelmer M. Wolterink, Tim Leiner, Pim A. de Jong, Nikolas Lessmann, Ivana Isgum

* IEEE Transactions on Medical Imaging (In press) 

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Coronary Artery Centerline Extraction in Cardiac CT Angiography Using a CNN-Based Orientation Classifier


Oct 24, 2018
Jelmer M. Wolterink, Robbert W. van Hamersvelt, Max A. Viergever, Tim Leiner, Ivana Išgum

* Accepted in Medical Image Analysis 

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Generative adversarial networks and adversarial methods in biomedical image analysis


Oct 24, 2018
Jelmer M. Wolterink, Konstantinos Kamnitsas, Christian Ledig, Ivana Išgum


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Automatic Segmentation of Thoracic Aorta Segments in Low-Dose Chest CT


Oct 09, 2018
Julia M. H. Noothout, Bob D. de Vos, Jelmer M. Wolterink, Ivana Isgum

* SPIE Medical Imaging, 2018, vol. 10574, pp. 105741S 

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Towards increased trustworthiness of deep learning segmentation methods on cardiac MRI


Sep 29, 2018
Jörg Sander, Bob D. de Vos, Jelmer M. Wolterink, Ivana Išgum

* This work has been submitted to SPIE 2019 conference 

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Improving Myocardium Segmentation in Cardiac CT Angiography using Spectral Information


Sep 27, 2018
Steffen Bruns, Jelmer M. Wolterink, Robbert W. van Hamersvelt, Majd Zreik, Tim Leiner, Ivana Išgum


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A Recurrent CNN for Automatic Detection and Classification of Coronary Artery Plaque and Stenosis in Coronary CT Angiography


Aug 20, 2018
Majd Zreik, Robbert W. van Hamersvelt, Jelmer M. Wolterink, Tim Leiner, Max A. Viergever, Ivana Isgum

* Submitted to IEEE Transactions on Medical Imaging on 20.08.2018 

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CNN-based Landmark Detection in Cardiac CTA Scans


Apr 13, 2018
Julia M. H. Noothout, Bob D. de Vos, Jelmer M. Wolterink, Tim Leiner, Ivana Išgum

* This work was submitted to MIDL 2018 Conference 

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Blood Vessel Geometry Synthesis using Generative Adversarial Networks


Apr 12, 2018
Jelmer M. Wolterink, Tim Leiner, Ivana Isgum

* Submitted to the 1st Conference on Medical Imaging with Deep Learning (MIDL2018), Amsterdam, The Netherlands (https://openreview.net/forum?id=SJ4N7isiG

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Deep learning analysis of the myocardium in coronary CT angiography for identification of patients with functionally significant coronary artery stenosis


Dec 06, 2017
Majd Zreik, Nikolas Lessmann, Robbert W. van Hamersvelt, Jelmer M. Wolterink, Michiel Voskuil, Max A. Viergever, Tim Leiner, Ivana Išgum

* This paper was submitted in April 2017 and accepted in November 2017 for publication in Medical Image Analysis. Please cite as: Zreik et al., Medical Image Analysis, 2018, vol. 44, pp. 72-85 

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Deep MR to CT Synthesis using Unpaired Data


Aug 03, 2017
Jelmer M. Wolterink, Anna M. Dinkla, Mark H. F. Savenije, Peter R. Seevinck, Cornelis A. T. van den Berg, Ivana Isgum

* MICCAI 2017 Workshop on Simulation and Synthesis in Medical Imaging 

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Automatic Segmentation and Disease Classification Using Cardiac Cine MR Images


Aug 03, 2017
Jelmer M. Wolterink, Tim Leiner, Max A. Viergever, Ivana Isgum

* Accepted in STACOM Automated Cardiac Diagnosis Challenge 2017 

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ConvNet-Based Localization of Anatomical Structures in 3D Medical Images


Apr 19, 2017
Bob D. de Vos, Jelmer M. Wolterink, Pim A. de Jong, Tim Leiner, Max A. Viergever, Ivana Išgum

* IEEE Transactions on Medical Imaging , vol.PP, no.99, pp.1-1 (2017) 

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Dilated Convolutional Neural Networks for Cardiovascular MR Segmentation in Congenital Heart Disease


Apr 12, 2017
Jelmer M. Wolterink, Tim Leiner, Max A. Viergever, Ivana Išgum

* RAMBO 2016, HVSMR 2016. LNCS 10129. pp. 95-102 

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Deep Learning for Multi-Task Medical Image Segmentation in Multiple Modalities


Apr 11, 2017
Pim Moeskops, Jelmer M. Wolterink, Bas H. M. van der Velden, Kenneth G. A. Gilhuijs, Tim Leiner, Max A. Viergever, Ivana Išgum

* Moeskops, P., Wolterink, J.M., van der Velden, B.H.M., Gilhuijs, K.G.A., Leiner, T., Viergever, M.A., I\v{s}gum, I. Deep learning for multi-task medical image segmentation in multiple modalities. In: MICCAI 2016, pp. 478-486 

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