Certain embedding types outperform others in different scenarios, e.g., subword-based embeddings can model rare words well and domain-specific embeddings can better represent in-domain terms. Therefore, recent works consider attention-based meta-embeddings to combine different embedding types. We demonstrate that these methods have two shortcomings: First, the attention weights are calculated without knowledge of word properties. Second, the different embedding types can form clusters in the common embedding space, preventing the computation of a meaningful average of different embeddings and thus, reducing performance. We propose to solve these problems by using feature-based meta-embeddings learned with adversarial training. Our experiments and analysis on sentence classification and sequence tagging tasks show that our approach is effective. We set the new state of the art on various datasets across languages and domains.
Natural language processing has huge potential in the medical domain which recently led to a lot of research in this field. However, a prerequisite of secure processing of medical documents, e.g., patient notes and clinical trials, is the proper de-identification of privacy-sensitive information. In this paper, we describe our NLNDE system, with which we participated in the MEDDOCAN competition, the medical document anonymization task of IberLEF 2019. We address the task of detecting and classifying protected health information from Spanish data as a sequence-labeling problem and investigate different embedding methods for our neural network. Despite dealing in a non-standard language and domain setting, the NLNDE system achieves promising results in the competition.
Named entity recognition has been extensively studied on English news texts. However, the transfer to other domains and languages is still a challenging problem. In this paper, we describe the system with which we participated in the first subtrack of the PharmaCoNER competition of the BioNLP Open Shared Tasks 2019. Aiming at pharmacological entity detection in Spanish texts, the task provides a non-standard domain and language setting. However, we propose an architecture that requires neither language nor domain expertise. We treat the task as a sequence labeling task and experiment with attention-based embedding selection and the training on automatically annotated data to further improve our system's performance. Our system achieves promising results, especially by combining the different techniques, and reaches up to 88.6% F1 in the competition.
Exploiting natural language processing in the clinical domain requires de-identification, i.e., anonymization of personal information in texts. However, current research considers de-identification and downstream tasks, such as concept extraction, only in isolation and does not study the effects of de-identification on other tasks. In this paper, we close this gap by reporting concept extraction performance on automatically anonymized data and investigating joint models for de-identification and concept extraction. In particular, we propose a stacked model with restricted access to privacy-sensitive information and a multitask model. We set the new state of the art on benchmark datasets in English (96.1% F1 for de-identification and 88.9% F1 for concept extraction) and Spanish (91.4% F1 for concept extraction).
Although temporal tagging is still dominated by rule-based systems, there have been recent attempts at neural temporal taggers. However, all of them focus on monolingual settings. In this paper, we explore multilingual methods for the extraction of temporal expressions from text and investigate adversarial training for aligning embedding spaces to one common space. With this, we create a single multilingual model that can also be transferred to unseen languages and set the new state of the art in those cross-lingual transfer experiments.
Recent work showed that embeddings from related languages can improve the performance of sequence tagging, even for monolingual models. In this analysis paper, we investigate whether the best auxiliary language can be predicted based on language distances and show that the most related language is not always the best auxiliary language. Further, we show that attention-based meta-embeddings can effectively combine pre-trained embeddings from different languages for sequence tagging and set new state-of-the-art results for part-of-speech tagging in five languages.