Red Teaming Models for Hyperspectral Image Analysis Using Explainable AI

Remote sensing (RS) applications in the space domain demand machine learning (ML) models that are reliable, robust, and quality-assured, making red teaming a vital approach for identifying and exposing potential flaws and biases. Since both fields advance independently, there is a notable gap in integrating red teaming strategies into RS. This paper introduces a methodology for examining ML models operating on hyperspectral images within the HYPERVIEW challenge, focusing on soil parameters' estimation. We use post-hoc explanation methods from the Explainable AI (XAI) domain to critically assess the best performing model that won the HYPERVIEW challenge and served as an inspiration for the model deployed on board the INTUITION-1 hyperspectral mission. Our approach effectively red teams the model by pinpointing and validating key shortcomings, constructing a model that achieves comparable performance using just 1% of the input features and a mere up to 5% performance loss. Additionally, we propose a novel way of visualizing explanations that integrate domain-specific information about hyperspectral bands (wavelengths) and data transformations to better suit interpreting models for hyperspectral image analysis.

Coronary artery segmentation in non-contrast calcium scoring CT images using deep learning

Precise localization of coronary arteries in Computed Tomography (CT) scans is critical from the perspective of medical assessment of coronary artery disease. Although various methods exist that offer high-quality segmentation of coronary arteries in cardiac contrast-enhanced CT scans, the potential of less invasive, non-contrast CT in this area is still not fully exploited. Since such fine anatomical structures are hardly visible in this type of medical images, the existing methods are characterized by high recall and low precision, and are used mainly for filtering of atherosclerotic plaques in the context of calcium scoring. In this paper, we address this research gap and introduce a deep learning algorithm for segmenting coronary arteries in multi-vendor ECG-gated non-contrast cardiac CT images which benefits from a novel framework for semi-automatic generation of Ground Truth (GT) via image registration. We hypothesize that the proposed GT generation process is much more efficient in this case than manual segmentation, since it allows for a fast generation of large volumes of diverse data, which leads to well-generalizing models. To investigate and thoroughly evaluate the segmentation quality based on such an approach, we propose a novel method for manual mesh-to-image registration, which is used to create our test-GT. The experimental study shows that the trained model has significantly higher accuracy than the GT used for training, and leads to the Dice and clDice metrics close to the interrater variability.

Quantum Machine Learning for Remote Sensing: Exploring potential and challenges

The industry of quantum technologies is rapidly expanding, offering promising opportunities for various scientific domains. Among these emerging technologies, Quantum Machine Learning (QML) has attracted considerable attention due to its potential to revolutionize data processing and analysis. In this paper, we investigate the application of QML in the field of remote sensing. It is believed that QML can provide valuable insights for analysis of data from space. We delve into the common beliefs surrounding the quantum advantage in QML for remote sensing and highlight the open challenges that need to be addressed. To shed light on the challenges, we conduct a study focused on the problem of kernel value concentration, a phenomenon that adversely affects the runtime of quantum computers. Our findings indicate that while this issue negatively impacts quantum computer performance, it does not entirely negate the potential quantum advantage in QML for remote sensing.

Cloud Detection in Multispectral Satellite Images Using Support Vector Machines With Quantum Kernels

Support vector machines (SVMs) are a well-established classifier effectively deployed in an array of pattern recognition and classification tasks. In this work, we consider extending classic SVMs with quantum kernels and applying them to satellite data analysis. The design and implementation of SVMs with quantum kernels (hybrid SVMs) is presented. It consists of the Quantum Kernel Estimation (QKE) procedure combined with a classic SVM training routine. The pixel data are mapped to the Hilbert space using ZZ-feature maps acting on the parameterized ansatz state. The parameters are optimized to maximize the kernel target alignment. We approach the problem of cloud detection in satellite image data, which is one of the pivotal steps in both on-the-ground and on-board satellite image analysis processing chains. The experiments performed over the benchmark Landsat-8 multispectral dataset revealed that the simulated hybrid SVM successfully classifies satellite images with accuracy on par with classic SVMs.

Optimizing Kernel-Target Alignment for cloud detection in multispectral satellite images

The optimization of Kernel-Target Alignment (TA) has been recently proposed as a way to reduce the number of hardware resources in quantum classifiers. It allows to exchange highly expressive and costly circuits to moderate size, task oriented ones. In this work we propose a simple toy model to study the optimization landscape of the Kernel-Target Alignment. We find that for underparameterized circuits the optimization landscape possess either many local extrema or becomes flat with narrow global extremum. We find the dependence of the width of the global extremum peak on the amount of data introduced to the model. The experimental study was performed using multispectral satellite data, and we targeted the cloud detection task, being one of the most fundamental and important image analysis tasks in remote sensing.

Squeezing nnU-Nets with Knowledge Distillation for On-Board Cloud Detection

Cloud detection is a pivotal satellite image pre-processing step that can be performed both on the ground and on board a satellite to tag useful images. In the latter case, it can reduce the amount of data to downlink by pruning the cloudy areas, or to make a satellite more autonomous through data-driven acquisition re-scheduling. We approach this task with nnU-Nets, a self-reconfigurable framework able to perform meta-learning of a segmentation network over various datasets. Unfortunately, such models are commonly memory-inefficient due to their (very) large architectures. To benefit from them in on-board processing, we compress nnU-Nets with knowledge distillation into much smaller and compact U-Nets. Our experiments, performed over Sentinel-2 and Landsat-8 images revealed that nnU-Nets deliver state-of-the-art performance without any manual design. Our approach was ranked within the top 7% best solutions (across 847 teams) in the On Cloud N: Cloud Cover Detection Challenge, where we reached the Jaccard index of 0.882 over more than 10k unseen Sentinel-2 images (the winners obtained 0.897, the baseline U-Net with the ResNet-34 backbone: 0.817, and the classic Sentinel-2 image thresholding: 0.652). Finally, we showed that knowledge distillation enables to elaborate dramatically smaller (almost 280x) U-Nets when compared to nnU-Nets while still maintaining their segmentation capabilities.

Detecting Clouds in Multispectral Satellite Images Using Quantum-Kernel Support Vector Machines

Support vector machines (SVMs) are a well-established classifier effectively deployed in an array of classification tasks. In this work, we consider extending classical SVMs with quantum kernels and applying them to satellite data analysis. The design and implementation of SVMs with quantum kernels (hybrid SVMs) are presented. Here, the pixels are mapped to the Hilbert space using a family of parameterized quantum feature maps (related to quantum kernels). The parameters are optimized to maximize the kernel target alignment. The quantum kernels have been selected such that they enabled analysis of numerous relevant properties while being able to simulate them with classical computers on a real-life large-scale dataset. Specifically, we approach the problem of cloud detection in the multispectral satellite imagery, which is one of the pivotal steps in both on-the-ground and on-board satellite image analysis processing chains. The experiments performed over the benchmark Landsat-8 multispectral dataset revealed that the simulated hybrid SVM successfully classifies satellite images with accuracy comparable to the classical SVM with the RBF kernel for large datasets. Interestingly, for large datasets, the high accuracy was also observed for the simple quantum kernels, lacking quantum entanglement.

Multitemporal and multispectral data fusion for super-resolution of Sentinel-2 images

Multispectral Sentinel-2 images are a valuable source of Earth observation data, however spatial resolution of their spectral bands limited to 10 m, 20 m, and 60 m ground sampling distance remains insufficient in many cases. This problem can be addressed with super-resolution, aimed at reconstructing a high-resolution image from a low-resolution observation. For Sentinel-2, spectral information fusion allows for enhancing the 20 m and 60 m bands to the 10 m resolution. Also, there were attempts to combine multitemporal stacks of individual Sentinel-2 bands, however these two approaches have not been combined so far. In this paper, we introduce DeepSent -- a new deep network for super-resolving multitemporal series of multispectral Sentinel-2 images. It is underpinned with information fusion performed simultaneously in the spectral and temporal dimensions to generate an enlarged multispectral image. In our extensive experimental study, we demonstrate that our solution outperforms other state-of-the-art techniques that realize either multitemporal or multispectral data fusion. Furthermore, we show that the advantage of DeepSent results from how these two fusion types are combined in a single architecture, which is superior to performing such fusion in a sequential manner. Importantly, we have applied our method to super-resolve real-world Sentinel-2 images, enhancing the spatial resolution of all the spectral bands to 3.3 m nominal ground sampling distance, and we compare the outcome with very high-resolution WorldView-2 images. We will publish our implementation upon paper acceptance, and we expect it will increase the possibilities of exploiting super-resolved Sentinel-2 images in real-life applications.

Biomedical image analysis competitions: The state of current participation practice

The number of international benchmarking competitions is steadily increasing in various fields of machine learning (ML) research and practice. So far, however, little is known about the common practice as well as bottlenecks faced by the community in tackling the research questions posed. To shed light on the status quo of algorithm development in the specific field of biomedical imaging analysis, we designed an international survey that was issued to all participants of challenges conducted in conjunction with the IEEE ISBI 2021 and MICCAI 2021 conferences (80 competitions in total). The survey covered participants' expertise and working environments, their chosen strategies, as well as algorithm characteristics. A median of 72% challenge participants took part in the survey. According to our results, knowledge exchange was the primary incentive (70%) for participation, while the reception of prize money played only a minor role (16%). While a median of 80 working hours was spent on method development, a large portion of participants stated that they did not have enough time for method development (32%). 25% perceived the infrastructure to be a bottleneck. Overall, 94% of all solutions were deep learning-based. Of these, 84% were based on standard architectures. 43% of the respondents reported that the data samples (e.g., images) were too large to be processed at once. This was most commonly addressed by patch-based training (69%), downsampling (37%), and solving 3D analysis tasks as a series of 2D tasks. K-fold cross-validation on the training set was performed by only 37% of the participants and only 50% of the participants performed ensembling based on multiple identical models (61%) or heterogeneous models (39%). 48% of the respondents applied postprocessing steps.

Self-Configuring nnU-Nets Detect Clouds in Satellite Images

Cloud detection is a pivotal satellite image pre-processing step that can be performed both on the ground and on board a satellite to tag useful images. In the latter case, it can help to reduce the amount of data to downlink by pruning the cloudy areas, or to make a satellite more autonomous through data-driven acquisition re-scheduling of the cloudy areas. We approach this important task with nnU-Nets, a self-reconfigurable framework able to perform meta-learning of a segmentation network over various datasets. Our experiments, performed over Sentinel-2 and Landsat-8 multispectral images revealed that nnU-Nets deliver state-of-the-art cloud segmentation performance without any manual design. Our approach was ranked within the top 7% best solutions (across 847 participating teams) in the On Cloud N: Cloud Cover Detection Challenge, where we reached the Jaccard index of 0.882 over more than 10k unseen Sentinel-2 image patches (the winners obtained 0.897, whereas the baseline U-Net with the ResNet-34 backbone used as an encoder: 0.817, and the classic Sentinel-2 image thresholding: 0.652).