Geometric Embedding Alignment via Curvature Matching in Transfer Learning

Geometrical interpretations of deep learning models offer insightful perspectives into their underlying mathematical structures. In this work, we introduce a novel approach that leverages differential geometry, particularly concepts from Riemannian geometry, to integrate multiple models into a unified transfer learning framework. By aligning the Ricci curvature of latent space of individual models, we construct an interrelated architecture, namely Geometric Embedding Alignment via cuRvature matching in transfer learning (GEAR), which ensures comprehensive geometric representation across datapoints. This framework enables the effective aggregation of knowledge from diverse sources, thereby improving performance on target tasks. We evaluate our model on 23 molecular task pairs sourced from various domains and demonstrate significant performance gains over existing benchmark model under both random (14.4%) and scaffold (8.3%) data splits.

MolMole: Molecule Mining from Scientific Literature

The extraction of molecular structures and reaction data from scientific documents is challenging due to their varied, unstructured chemical formats and complex document layouts. To address this, we introduce MolMole, a vision-based deep learning framework that unifies molecule detection, reaction diagram parsing, and optical chemical structure recognition (OCSR) into a single pipeline for automating the extraction of chemical data directly from page-level documents. Recognizing the lack of a standard page-level benchmark and evaluation metric, we also present a testset of 550 pages annotated with molecule bounding boxes, reaction labels, and MOLfiles, along with a novel evaluation metric. Experimental results demonstrate that MolMole outperforms existing toolkits on both our benchmark and public datasets. The benchmark testset will be publicly available, and the MolMole toolkit will be accessible soon through an interactive demo on the LG AI Research website. For commercial inquiries, please contact us at \href{mailto:contact_ddu@lgresearch.ai}{contact\_ddu@lgresearch.ai}.