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Abstractified Multi-instance Learning (AMIL) for Biomedical Relation Extraction


Oct 24, 2021
William Hogan , Molly Huang , Yannis Katsis , Tyler Baldwin , Ho-Cheol Kim , Yoshiki Vazquez Baeza , Andrew Bartko , Chun-Nan Hsu

* 3rd Conference on Automated Knowledge Base Construction (2021) 
* 14 pages, 3 figures, submitted to Automated Knowledge Base Construction (2021) 

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Theoretical Knowledge Graph Reasoning via Ending Anchored Rules


Dec 15, 2020
Canlin Zhang , Yannis Katsis , Yoshiki Vazquez-Baeza , Andrew Bartko , Ho-Cheol Kim , Chun-Nan Hsu

* Comparing to v2, v3 raises the lower bound of the connection set to be 2, which increases the performances on WN18RR for about 20 percent, and increases those on FB15K-237 for about 6 percent. People may refer to our presentation "EARDict_refinement" posted on github.com/ucsd-cmi/eardict for a detailed comparison between v2 and v3. We also revise our expressions a lot in v3 

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Utilizing stability criteria in choosing feature selection methods yields reproducible results in microbiome data


Nov 30, 2020
Lingjing Jiang , Niina Haiminen , Anna-Paola Carrieri , Shi Huang , Yoshiki Vazquez-Baeza , Laxmi Parida , Ho-Cheol Kim , Austin D. Swafford , Rob Knight , Loki Natarajan


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