Contrastive Image-Metadata Pre-Training for Materials Transmission Electron Microscopy

The vast majority of transmission electron microscopy (TEM) data never gets published and ends up on a backup drive until deleted to free up space. These left-over datasets are rich in detail and variation, often paired with automatically saved metadata of instrument state and acquisition parameters. In this work, we introduce a dataset of 7,330 high-angle annular dark-field scanning-TEM (HAADF-STEM) images from a single instrument to learn a joint embedding space between image metadata and HAADF image. These embeddings link image style with acquisition parameters, which allows us to train a generative style transfer network that can convert experimental images into the style they would have had if they were recorded with different instrument parameters. We evaluate the performance of the network and explore the usefulness of the technique for physical denoising.