PDE-SSM: A Spectral State Space Approach to Spatial Mixing in Diffusion Transformers

The success of vision transformers-especially for generative modeling-is limited by the quadratic cost and weak spatial inductive bias of self-attention. We propose PDE-SSM, a spatial state-space block that replaces attention with a learnable convection-diffusion-reaction partial differential equation. This operator encodes a strong spatial prior by modeling information flow via physically grounded dynamics rather than all-to-all token interactions. Solving the PDE in the Fourier domain yields global coupling with near-linear complexity of $O(N \log N)$, delivering a principled and scalable alternative to attention. We integrate PDE-SSM into a flow-matching generative model to obtain the PDE-based Diffusion Transformer PDE-SSM-DiT. Empirically, PDE-SSM-DiT matches or exceeds the performance of state-of-the-art Diffusion Transformers while substantially reducing compute. Our results show that, analogous to 1D settings where SSMs supplant attention, multi-dimensional PDE operators provide an efficient, inductive-bias-rich foundation for next-generation vision models.

Probabilistic Gaussian Homotopy: A Probability-Space Continuation Framework for Nonconvex Optimization

We introduce Probabilistic Gaussian Homotopy (PGH), a probability-space continuation framework for nonconvex optimization. Unlike classical Gaussian homotopy, which smooths the objective and uniformly averages gradients, PGH deforms the associated Boltzmann distribution and induces Boltzmann-weighted aggregation of perturbed gradients, which exponentially biases descent directions toward low-energy regions. We show that PGH corresponds to a log-sum-exp (soft-min) homotopy that smooths a nonconvex objective at scale $λ>0$ and recovers the original objective as $λ\to 0$, yielding a posterior-mean generalization of the Moreau envelope, and we derive a dynamical system governing minimizer evolution along an annealed homotopy path. This establishes a principled connection between Gaussian continuation, Bayesian denoising, and diffusion-style smoothing. We further propose Probabilistic Gaussian Homotopy Optimization (PGHO), a practical stochastic algorithm based on Monte Carlo gradient estimation, and demonstrate strong performance on high-dimensional nonconvex benchmarks and sparse recovery problems where classical gradient methods and objective-space smoothing frequently fail.

Preconditioned Score and Flow Matching

Flow matching and score-based diffusion train vector fields under intermediate distributions $p_t$, whose geometry can strongly affect their optimization. We show that the covariance $Σ_t$ of $p_t$ governs optimization bias: when $Σ_t$ is ill-conditioned, and gradient-based training rapidly fits high-variance directions while systematically under-optimizing low-variance modes, leading to learning that plateaus at suboptimal weights. We formalize this effect in analytically tractable settings and propose reversible, label-conditional \emph{preconditioning} maps that reshape the geometry of $p_t$ by improving the conditioning of $Σ_t$ without altering the underlying generative model. Rather than accelerating early convergence, preconditioning primarily mitigates optimization stagnation by enabling continued progress along previously suppressed directions. Across MNIST latent flow matching, and additional high-resolution datasets, we empirically track conditioning diagnostics and distributional metrics and show that preconditioning consistently yields better-trained models by avoiding suboptimal plateaus.

Learning to Advect: A Neural Semi-Lagrangian Architecture for Weather Forecasting

Recent machine-learning approaches to weather forecasting often employ a monolithic architecture, where distinct physical mechanisms (advection, transport), diffusion-like mixing, thermodynamic processes, and forcing are represented implicitly within a single large network. This representation is particularly problematic for advection, where long-range transport must be treated with expensive global interaction mechanisms or through deep, stacked convolutional layers. To mitigate this, we present PARADIS, a physics-inspired global weather prediction model that imposes inductive biases on network behavior through a functional decomposition into advection, diffusion, and reaction blocks acting on latent variables. We implement advection through a Neural Semi-Lagrangian operator that performs trajectory-based transport via differentiable interpolation on the sphere, enabling end-to-end learning of both the latent modes to be transported and their characteristic trajectories. Diffusion-like processes are modeled through depthwise-separable spatial mixing, while local source terms and vertical interactions are modeled via pointwise channel interactions, enabling operator-level physical structure. PARADIS provides state-of-the-art forecast skill at a fraction of the training cost. On ERA5-based benchmarks, the 1 degree PARADIS model, with a total training cost of less than a GPU month, meets or exceeds the performance of 0.25 degree traditional and machine-learning baselines, including the ECMWF HRES forecast and DeepMind's GraphCast.

TANGO: Graph Neural Dynamics via Learned Energy and Tangential Flows

We introduce TANGO -- a dynamical systems inspired framework for graph representation learning that governs node feature evolution through a learned energy landscape and its associated descent dynamics. At the core of our approach is a learnable Lyapunov function over node embeddings, whose gradient defines an energy-reducing direction that guarantees convergence and stability. To enhance flexibility while preserving the benefits of energy-based dynamics, we incorporate a novel tangential component, learned via message passing, that evolves features while maintaining the energy value. This decomposition into orthogonal flows of energy gradient descent and tangential evolution yields a flexible form of graph dynamics, and enables effective signal propagation even in flat or ill-conditioned energy regions, that often appear in graph learning. Our method mitigates oversquashing and is compatible with different graph neural network backbones. Empirically, TANGO achieves strong performance across a diverse set of node and graph classification and regression benchmarks, demonstrating the effectiveness of jointly learned energy functions and tangential flows for graph neural networks.

Synthetic Geology -- Structural Geology Meets Deep Learning

Visualizing the first few kilometers of the Earth's subsurface, a long-standing challenge gating a virtually inexhaustible list of important applications, is coming within reach through deep learning. Building on techniques of generative artificial intelligence applied to voxelated images, we demonstrate a method that extends surface geological data supplemented by boreholes to a three-dimensional subsurface region by training a neural network. The Earth's land area having been extensively mapped for geological features, the bottleneck of this or any related technique is the availability of data below the surface. We close this data gap in the development of subsurface deep learning by designing a synthetic data-generator process that mimics eons of geological activity such as sediment compaction, volcanic intrusion, and tectonic dynamics to produce a virtually limitless number of samples of the near lithosphere. A foundation model trained on such synthetic data is able to generate a 3D image of the subsurface from a previously unseen map of surface topography and geology, showing increasing fidelity with increasing access to borehole data, depicting such structures as layers, faults, folds, dikes, and sills. We illustrate the early promise of the combination of a synthetic lithospheric generator with a trained neural network model using generative flow matching. Ultimately, such models will be fine-tuned on data from applicable campaigns, such as mineral prospecting in a given region. Though useful in itself, a regionally fine-tuned models may be employed not as an end but as a means: as an AI-based regularizer in a more traditional inverse problem application, in which the objective function represents the mismatch of additional data with physical models with applications in resource exploration, hazard assessment, and geotechnical engineering.

Graph Flow Matching: Enhancing Image Generation with Neighbor-Aware Flow Fields

Flow matching casts sample generation as learning a continuous-time velocity field that transports noise to data. Existing flow matching networks typically predict each point's velocity independently, considering only its location and time along its flow trajectory, and ignoring neighboring points. However, this pointwise approach may overlook correlations between points along the generation trajectory that could enhance velocity predictions, thereby improving downstream generation quality. To address this, we propose Graph Flow Matching (GFM), a lightweight enhancement that decomposes the learned velocity into a reaction term -- any standard flow matching network -- and a diffusion term that aggregates neighbor information via a graph neural module. This reaction-diffusion formulation retains the scalability of deep flow models while enriching velocity predictions with local context, all at minimal additional computational cost. Operating in the latent space of a pretrained variational autoencoder, GFM consistently improves Fr\'echet Inception Distance (FID) and recall across five image generation benchmarks (LSUN Church, LSUN Bedroom, FFHQ, AFHQ-Cat, and CelebA-HQ at $256\times256$), demonstrating its effectiveness as a modular enhancement to existing flow matching architectures.

Towards Efficient Training of Graph Neural Networks: A Multiscale Approach

Graph Neural Networks (GNNs) have emerged as a powerful tool for learning and inferring from graph-structured data, and are widely used in a variety of applications, often considering large amounts of data and large graphs. However, training on such data requires large memory and extensive computations. In this paper, we introduce a novel framework for efficient multiscale training of GNNs, designed to integrate information across multiscale representations of a graph. Our approach leverages a hierarchical graph representation, taking advantage of coarse graph scales in the training process, where each coarse scale graph has fewer nodes and edges. Based on this approach, we propose a suite of GNN training methods: such as coarse-to-fine, sub-to-full, and multiscale gradient computation. We demonstrate the effectiveness of our methods on various datasets and learning tasks.

Probabilistic Forecasting for Dynamical Systems with Missing or Imperfect Data

The modeling of dynamical systems is essential in many fields, but applying machine learning techniques is often challenging due to incomplete or noisy data. This study introduces a variant of stochastic interpolation (SI) for probabilistic forecasting, estimating future states as distributions rather than single-point predictions. We explore its mathematical foundations and demonstrate its effectiveness on various dynamical systems, including the challenging WeatherBench dataset.

Iterative Flow Matching -- Path Correction and Gradual Refinement for Enhanced Generative Modeling

Generative models for image generation are now commonly used for a wide variety of applications, ranging from guided image generation for entertainment to solving inverse problems. Nonetheless, training a generator is a non-trivial feat that requires fine-tuning and can lead to so-called hallucinations, that is, the generation of images that are unrealistic. In this work, we explore image generation using flow matching. We explain and demonstrate why flow matching can generate hallucinations, and propose an iterative process to improve the generation process. Our iterative process can be integrated into virtually $\textit{any}$ generative modeling technique, thereby enhancing the performance and robustness of image synthesis systems.