Autoencoder-based Optimization of Multi-user Molecule Mixture Communication Systems

In this paper, we introduce an autoencoder (AE)-based scheme for end-to-end optimization of a multi-user molecule mixture communication system. In the proposed scheme, each transmitter leverages an encoder network that maps the user symbol to a molecule mixture. The mixtures then propagate through the channel to the receiver, which samples the channel using a non-linear, cross-reactive sensor array. A decoder network then estimates the symbol transmitted by each user based on the sensor observations. The proposed scheme achieves, for a given signal-to-noise ratio, lower symbol error rates than a baseline scheme from the literature in a single-user setting with full channel state information. We additionally demonstrate that the proposed AE-based scheme allows reliable communication when the channel is unknown or changing. Finally, we show that for multiple access the system can account for different user priorities. In summary, the proposed AE-based scheme enables end-to-end system optimization in complex scenarios unsuitable for analytical treatment and thereby brings molecular communication systems closer to real-world deployment.

Molecule Mixture Detection and Design for MC Systems with Non-linear, Cross-reactive Receiver Arrays

Air-based molecular communication (MC) has the potential to be one of the first MC systems to be deployed in real-world applications, enabled by commercially available sensors. However, these sensors usually exhibit non-linear and cross-reactive behavior, contrary to the idealizing assumption of linear and perfectly molecule type-specific sensing often made in the MC literature. To address this mismatch, we propose several detectors and transmission schemes for a molecule mixture communication system where the receiver (RX) employs non-linear, cross-reactive sensors. All proposed schemes are based on the first- and second-order moments of the symbol likelihoods that are fed through the non-linear RX using the Unscented Transform. In particular, we propose an approximate maximum likelihood (AML) symbol-by-symbol detector for inter-symbol-interference (ISI)-free transmission scenarios and a complementary mixture alphabet design algorithm which accounts for the RX characteristics. When significant ISI is present at high data rates, the AML detector can be adapted to exploit statistical ISI knowledge. Additionally, we propose a sequence detector which combines information from multiple symbol intervals. For settings where sequence detection is not possible due to extremely limited computational power at the RX, we propose an adaptive transmission scheme which can be combined with symbol-by-symbol detection. Using computer simulations, we validate all proposed detectors and algorithms based on the responses of commercially available sensors as well as artificially generated sensor data incorporating the characteristics of metal-oxide semiconductor sensors. By employing a general system model that accounts for transmitter noise, ISI, and general non-linear, cross-reactive RX arrays, this work enables reliable communication for a large class of MC systems.

The Confusion is Real: GRAPHIC - A Network Science Approach to Confusion Matrices in Deep Learning

Explainable artificial intelligence has emerged as a promising field of research to address reliability concerns in artificial intelligence. Despite significant progress in explainable artificial intelligence, few methods provide a systematic way to visualize and understand how classes are confused and how their relationships evolve as training progresses. In this work, we present GRAPHIC, an architecture-agnostic approach that analyzes neural networks on a class level. It leverages confusion matrices derived from intermediate layers using linear classifiers. We interpret these as adjacency matrices of directed graphs, allowing tools from network science to visualize and quantify learning dynamics across training epochs and intermediate layers. GRAPHIC provides insights into linear class separability, dataset issues, and architectural behavior, revealing, for example, similarities between flatfish and man and labeling ambiguities validated in a human study. In summary, by uncovering real confusions, GRAPHIC offers new perspectives on how neural networks learn. The code is available at https://github.com/Johanna-S-Froehlich/GRAPHIC.