Spectral Coherence Index: A Model-Free Metric for Protein Structural Ensemble Quality Assessment

Protein structural ensembles from NMR spectroscopy capture biologically important conformational heterogeneity, but it remains difficult to determine whether observed variation reflects coordinated motion or noise-like artifacts. We evaluate the Spectral Coherence Index (SCI), a model-free, rotation-invariant summary derived from the participation-ratio effective rank of the inter-model pairwise distance-variance matrix. Under grouped primary analysis of a Main110 cohort of 110 NMR ensembles (30--403 residues; 10--30 models per entry), SCI separated experimental ensembles from matched synthetic incoherent controls with AUC-ROC $= 0.973$ and Cliff's $δ= -0.945$. Relative to an internal 27-protein pilot, discrimination softened modestly, showing that pilot-era thresholds do not transfer perfectly to a larger, more heterogeneous cohort: the primary operating point $τ= 0.811$ yielded 95.5\% sensitivity and 89.1\% specificity. PDB-level sensitivity remained nearly unchanged (AUC $= 0.972$), and an independent 11-protein holdout reached AUC $= 0.983$. Across 5-fold grouped stratified cross-validation and leave-one-function-class-out testing, SCI remained strong (AUC $= 0.968$ and $0.971$), although $σ_{R_g}$ was the stronger single-feature discriminator and a QC-augmented multifeature model generalized best (AUC $= 0.989$ and $0.990$). Residue-level validation linked SCI-derived contributions to experimental RMSF across 110 proteins and showed broad concordance with GNM-based flexibility patterns. Rescue analyses showed that Main110 softening arose mainly from size and ensemble normalization rather than from loss of spectral signal. Together, these results establish SCI as an interpretable, bounded coherence summary that is most useful when embedded in a multimetric QC workflow for heterogeneous protein ensembles.

Grokking as a Falsifiable Finite-Size Transition

Grokking -- the delayed onset of generalization after early memorization -- is often described with phase-transition language, but that claim has lacked falsifiable finite-size inputs. Here we supply those inputs by treating the group order $p$ of $\mathbb{Z}_p$ as an admissible extensive variable and a held-out spectral head-tail contrast as a representation-level order parameter, then apply a condensed-matter-style diagnostic chain to coarse-grid sweeps and a dense near-critical addition audit. Binder-like crossings reveal a shared finite-size boundary, and susceptibility comparison strongly disfavors a smooth-crossover interpretation ($Δ\mathrm{AIC}=16.8$ in the near-critical audit). Phase-transition language in grokking can therefore be tested as a quantitative finite-size claim rather than invoked as analogy alone, although the transition order remains unresolved at present.

Conditioning on a Volatility Proxy Compresses the Apparent Timescale of Collective Market Correlation

We address the attribution problem for apparent slow collective dynamics: is the observed persistence intrinsic, or inherited from a persistent driver? For the leading eigenvalue fraction $ψ_1=λ_{\max}/N$ of S\&P 500 60-day rolling correlation matrices ($237$ stocks, 2004--2023), a VIX-coupled Ornstein--Uhlenbeck model reduces the effective relaxation time from $298$ to $61$ trading days and improves the fit over bare mean reversion by $Δ$BIC$=109$. On the decomposition sample, an informational residual of $\log(\mathrm{VIX})$ alone retains most of that gain ($Δ$BIC$=78.6$), whereas a mechanical VIX proxy alone does not improve the fit. Autocorrelation-matched placebo fields fail ($Δ$BIC$_{\max}=2.7$), disjoint weekly reconstructions still favor the field-coupled model ($Δ$BIC$=140$--$151$), and six anchored chronological holdouts preserve the out-of-sample advantage. Quiet-regime and field-stripped residual autocorrelation controls show the same collapse of persistence. Stronger hidden-variable extensions remain only partially supported. Within the tested stochastic class, conditioning on the observed VIX proxy absorbs most of the apparent slow dynamics.

Reservoir Subspace Injection for Online ICA under Top-n Whitening

Reservoir expansion can improve online independent component analysis (ICA) under nonlinear mixing, yet top-$n$ whitening may discard injected features. We formalize this bottleneck as \emph{reservoir subspace injection} (RSI): injected features help only if they enter the retained eigenspace without displacing passthrough directions. RSI diagnostics (IER, SSO, $ρ_x$) identify a failure mode in our top-$n$ setting: stronger injection increases IER but crowds out passthrough energy ($ρ_x: 1.00\!\rightarrow\!0.77$), degrading SI-SDR by up to $2.2$\,dB. A guarded RSI controller preserves passthrough retention and recovers mean performance to within $0.1$\,dB of baseline $1/N$ scaling. With passthrough preserved, RE-OICA improves over vanilla online ICA by $+1.7$\,dB under nonlinear mixing and achieves positive SI-SDR$_{\mathrm{sc}}$ on the tested super-Gaussian benchmark ($+0.6$\,dB).

A 1/R Law for Kurtosis Contrast in Balanced Mixtures

Kurtosis-based Independent Component Analysis (ICA) weakens in wide, balanced mixtures. We prove a sharp redundancy law: for a standardized projection with effective width $R_{\mathrm{eff}}$ (participation ratio), the population excess kurtosis obeys $|κ(y)|=O(κ_{\max}/R_{\mathrm{eff}})$, yielding the order-tight $O(c_bκ_{\max}/R)$ under balance (typically $c_b=O(\log R)$). As an impossibility screen, under standard finite-moment conditions for sample kurtosis estimation, surpassing the $O(1/\sqrt{T})$ estimation scale requires $R\lesssim κ_{\max}\sqrt{T}$. We also show that \emph{purification} -- selecting $m\!\ll\!R$ sign-consistent sources -- restores $R$-independent contrast $Ω(1/m)$, with a simple data-driven heuristic. Synthetic experiments validate the predicted decay, the $\sqrt{T}$ crossover, and contrast recovery.

Optimizing Brain-Computer Interface Performance: Advancing EEG Signals Channel Selection through Regularized CSP and SPEA II Multi-Objective Optimization

Brain-computer interface systems and the recording of brain activity has garnered significant attention across a diverse spectrum of applications. EEG signals have emerged as a modality for recording neural electrical activity. Among the methodologies designed for feature extraction from EEG data, the method of RCSP has proven to be an approach, particularly in the context of MI tasks. RCSP exhibits efficacy in the discrimination and classification of EEG signals. In optimizing the performance of this method, our research extends to a comparative analysis with conventional CSP techniques, as well as optimized methodologies designed for similar applications. Notably, we employ the meta-heuristic multi-objective Strength Pareto Evolutionary Algorithm II (SPEA-II) as a pivotal component of our research paradigm. This is a state-of-the-art approach in the selection of an subset of channels from a multichannel EEG signal with MI tasks. Our main objective is to formulate an optimum channel selection strategy aimed at identifying the most pertinent subset of channels from the multi-dimensional electroencephalogram (EEG) signals. One of the primary objectives inherent to channel selection in the EEG signal analysis pertains to the reduction of the channel count, an approach that enhances user comfort when utilizing gel-based EEG electrodes. Additionally, within this research, we took benefit of ensemble learning models as a component of our decision-making. This technique serves to mitigate the challenges associated with overfitting, especially when confronted with an extensive array of potentially redundant EEG channels and data noise. Our findings not only affirm the performance of RCSP in MI-based BCI systems, but also underscore the significance of channel selection strategies and ensemble learning techniques in optimizing the performance of EEG signal classification.

An Interpretable Cross-Attentive Multi-modal MRI Fusion Framework for Schizophrenia Diagnosis

Both functional and structural magnetic resonance imaging (fMRI and sMRI) are widely used for the diagnosis of mental disorder. However, combining complementary information from these two modalities is challenging due to their heterogeneity. Many existing methods fall short of capturing the interaction between these modalities, frequently defaulting to a simple combination of latent features. In this paper, we propose a novel Cross-Attentive Multi-modal Fusion framework (CAMF), which aims to capture both intra-modal and inter-modal relationships between fMRI and sMRI, enhancing multi-modal data representation. Specifically, our CAMF framework employs self-attention modules to identify interactions within each modality while cross-attention modules identify interactions between modalities. Subsequently, our approach optimizes the integration of latent features from both modalities. This approach significantly improves classification accuracy, as demonstrated by our evaluations on two extensive multi-modal brain imaging datasets, where CAMF consistently outperforms existing methods. Furthermore, the gradient-guided Score-CAM is applied to interpret critical functional networks and brain regions involved in schizophrenia. The bio-markers identified by CAMF align with established research, potentially offering new insights into the diagnosis and pathological endophenotypes of schizophrenia.